Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOC4P55056 TUBB8P6-201ENST00000436895 1288 ntBASIC14.44□□□□□ -0.1
APOC4P55056 AL355355.2-201ENST00000442321 338 ntBASIC14.44□□□□□ -0.1
APOC4P55056 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
APOC4P55056 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
APOC4P55056 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.44□□□□□ -0.1
APOC4P55056 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.44□□□□□ -0.1
APOC4P55056 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOC4P55056 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.44□□□□□ -0.1
APOC4P55056 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOC4P55056 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOC4P55056 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
APOC4P55056 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
APOC4P55056 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOC4P55056 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOC4P55056 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC4P55056 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.43□□□□□ -0.1
APOC4P55056 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOC4P55056 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.43□□□□□ -0.1
APOC4P55056 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC4P55056 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC4P55056 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC4P55056 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
APOC4P55056 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC4P55056 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC4P55056 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
APOC4P55056 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC4P55056 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC4P55056 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.43□□□□□ -0.1
APOC4P55056 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
APOC4P55056 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOC4P55056 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC4P55056 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.43□□□□□ -0.1
APOC4P55056 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.43□□□□□ -0.1
APOC4P55056 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.43□□□□□ -0.1
APOC4P55056 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.43□□□□□ -0.1
APOC4P55056 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC14.43□□□□□ -0.1
APOC4P55056 AL353708.3-201ENST00000610272 989 ntBASIC14.43□□□□□ -0.1
APOC4P55056 AC113410.3-201ENST00000623366 203 ntBASIC14.43□□□□□ -0.1
APOC4P55056 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.43□□□□□ -0.1
APOC4P55056 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOC4P55056 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC4P55056 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC4P55056 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOC4P55056 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC4P55056 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC4P55056 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC4P55056 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
APOC4P55056 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
APOC4P55056 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
APOC4P55056 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC4P55056 AP001271.2-201ENST00000624018 1556 ntBASIC14.43□□□□□ -0.1
APOC4P55056 BX119927.1-201ENST00000636596 1552 ntBASIC14.43□□□□□ -0.1
APOC4P55056 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.42□□□□□ -0.1
APOC4P55056 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC4P55056 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.42□□□□□ -0.1
APOC4P55056 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC4P55056 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC4P55056 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
APOC4P55056 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC4P55056 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.42□□□□□ -0.1
APOC4P55056 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC4P55056 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.42□□□□□ -0.1
APOC4P55056 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.42□□□□□ -0.1
APOC4P55056 TSPY7P-201ENST00000431358 1114 ntBASIC14.42□□□□□ -0.1
APOC4P55056 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC4P55056 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.42□□□□□ -0.1
APOC4P55056 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.42□□□□□ -0.1
APOC4P55056 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.42□□□□□ -0.1
APOC4P55056 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
APOC4P55056 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.42□□□□□ -0.1
APOC4P55056 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOC4P55056 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOC4P55056 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.42□□□□□ -0.1
APOC4P55056 CD177P1-201ENST00000606252 935 ntBASIC14.42□□□□□ -0.1
APOC4P55056 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
APOC4P55056 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOC4P55056 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC14.42□□□□□ -0.1
APOC4P55056 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
APOC4P55056 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC4P55056 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC4P55056 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC4P55056 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC4P55056 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC4P55056 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC4P55056 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC4P55056 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC4P55056 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC4P55056 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC4P55056 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC4P55056 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOC4P55056 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC4P55056 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.41□□□□□ -0.1
APOC4P55056 KSR1P1-201ENST00000446298 240 ntBASIC14.41□□□□□ -0.1
APOC4P55056 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC4P55056 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.41□□□□□ -0.1
APOC4P55056 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOC4P55056 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.41□□□□□ -0.1
APOC4P55056 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
APOC4P55056 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms