Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC005363.2-201ENST00000618631 242 ntBASIC20.59■□□□□ 0.89
EPHB3P54753 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHB3P54753 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
EPHB3P54753 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.59■□□□□ 0.89
EPHB3P54753 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHB3P54753 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EPHB3P54753 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.58■□□□□ 0.89
EPHB3P54753 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
EPHB3P54753 AC007375.3-201ENST00000600936 2314 ntBASIC20.58■□□□□ 0.89
EPHB3P54753 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
EPHB3P54753 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.58■□□□□ 0.89
EPHB3P54753 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.58■□□□□ 0.89
EPHB3P54753 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.58■□□□□ 0.89
EPHB3P54753 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.58■□□□□ 0.89
EPHB3P54753 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
EPHB3P54753 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
EPHB3P54753 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
EPHB3P54753 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
EPHB3P54753 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.57■□□□□ 0.88
EPHB3P54753 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EPHB3P54753 CYP2D8P-201ENST00000433633 1490 ntBASIC20.57■□□□□ 0.88
EPHB3P54753 TMEM179-206ENST00000616017 1645 ntBASIC20.57■□□□□ 0.88
EPHB3P54753 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EPHB3P54753 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHB3P54753 MESTP1-201ENST00000404287 994 ntBASIC20.57■□□□□ 0.88
EPHB3P54753 TMPOP1-202ENST00000424642 1267 ntBASIC20.57■□□□□ 0.88
EPHB3P54753 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.57■□□□□ 0.88
EPHB3P54753 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.57■□□□□ 0.88
EPHB3P54753 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHB3P54753 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.57■□□□□ 0.88
EPHB3P54753 B3GAT3P1-201ENST00000471720 806 ntBASIC20.57■□□□□ 0.88
EPHB3P54753 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EPHB3P54753 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
EPHB3P54753 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
EPHB3P54753 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EPHB3P54753 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.57■□□□□ 0.88
EPHB3P54753 DGCR10-201ENST00000609839 495 ntBASIC20.57■□□□□ 0.88
EPHB3P54753 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
EPHB3P54753 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.57■□□□□ 0.88
EPHB3P54753 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHB3P54753 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHB3P54753 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHB3P54753 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHB3P54753 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.57■□□□□ 0.88
EPHB3P54753 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EPHB3P54753 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB3P54753 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB3P54753 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB3P54753 KRT18P22-201ENST00000402024 1347 ntBASIC20.56■□□□□ 0.88
EPHB3P54753 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB3P54753 AP001271.2-201ENST00000624018 1556 ntBASIC20.56■□□□□ 0.88
EPHB3P54753 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
EPHB3P54753 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.56■□□□□ 0.88
EPHB3P54753 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB3P54753 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB3P54753 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB3P54753 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB3P54753 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB3P54753 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.56■□□□□ 0.88
EPHB3P54753 AC011506.1-201ENST00000474329 610 ntBASIC20.56■□□□□ 0.88
EPHB3P54753 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.56■□□□□ 0.88
EPHB3P54753 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB3P54753 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB3P54753 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.56■□□□□ 0.88
EPHB3P54753 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
EPHB3P54753 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB3P54753 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EPHB3P54753 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHB3P54753 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHB3P54753 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHB3P54753 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.55■□□□□ 0.88
EPHB3P54753 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHB3P54753 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
EPHB3P54753 AC010947.1-201ENST00000623454 693 ntBASIC20.55■□□□□ 0.88
EPHB3P54753 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHB3P54753 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHB3P54753 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
EPHB3P54753 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHB3P54753 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB3P54753 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB3P54753 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB3P54753 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB3P54753 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB3P54753 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.54■□□□□ 0.88
EPHB3P54753 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.54■□□□□ 0.88
EPHB3P54753 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB3P54753 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB3P54753 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.54■□□□□ 0.88
EPHB3P54753 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.54■□□□□ 0.88
EPHB3P54753 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.54■□□□□ 0.88
EPHB3P54753 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.54■□□□□ 0.88
EPHB3P54753 C2orf69P3-201ENST00000565542 1120 ntBASIC20.54■□□□□ 0.88
EPHB3P54753 RN7SL850P-201ENST00000579959 291 ntBASIC20.54■□□□□ 0.88
EPHB3P54753 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.54■□□□□ 0.88
EPHB3P54753 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB3P54753 HLA-A-209ENST00000638375 975 ntBASIC20.54■□□□□ 0.88
EPHB3P54753 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB3P54753 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB3P54753 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB3P54753 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms