Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC116351.2-201ENST00000606540 1585 ntBASIC19.64■□□□□ 0.73
NUBP1P53384 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.64■□□□□ 0.73
NUBP1P53384 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUBP1P53384 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUBP1P53384 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NUBP1P53384 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUBP1P53384 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUBP1P53384 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUBP1P53384 TFP1-202ENST00000475455 1573 ntBASIC19.63■□□□□ 0.73
NUBP1P53384 KRT8P17-201ENST00000453110 1448 ntBASIC19.63■□□□□ 0.73
NUBP1P53384 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.63■□□□□ 0.73
NUBP1P53384 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NUBP1P53384 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUBP1P53384 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.63■□□□□ 0.73
NUBP1P53384 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NUBP1P53384 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.63■□□□□ 0.73
NUBP1P53384 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.63■□□□□ 0.73
NUBP1P53384 TSSC2-201ENST00000450217 709 ntBASIC19.63■□□□□ 0.73
NUBP1P53384 AC009078.2-202ENST00000463353 338 ntBASIC19.63■□□□□ 0.73
NUBP1P53384 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.63■□□□□ 0.73
NUBP1P53384 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.63■□□□□ 0.73
NUBP1P53384 AC104692.2-201ENST00000603054 253 ntBASIC19.63■□□□□ 0.73
NUBP1P53384 AL121672.3-201ENST00000608644 468 ntBASIC19.63■□□□□ 0.73
NUBP1P53384 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NUBP1P53384 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUBP1P53384 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NUBP1P53384 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
NUBP1P53384 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.63■□□□□ 0.73
NUBP1P53384 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUBP1P53384 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NUBP1P53384 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUBP1P53384 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
NUBP1P53384 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUBP1P53384 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NUBP1P53384 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUBP1P53384 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUBP1P53384 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC19.62■□□□□ 0.73
NUBP1P53384 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.62■□□□□ 0.73
NUBP1P53384 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NUBP1P53384 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.62■□□□□ 0.73
NUBP1P53384 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NUBP1P53384 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NUBP1P53384 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.62■□□□□ 0.73
NUBP1P53384 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
NUBP1P53384 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUBP1P53384 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
NUBP1P53384 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NUBP1P53384 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.61■□□□□ 0.73
NUBP1P53384 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NUBP1P53384 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUBP1P53384 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUBP1P53384 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUBP1P53384 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.61■□□□□ 0.73
NUBP1P53384 AL645929.1-201ENST00000420084 975 ntBASIC19.61■□□□□ 0.73
NUBP1P53384 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC19.61■□□□□ 0.73
NUBP1P53384 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.61■□□□□ 0.73
NUBP1P53384 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC19.61■□□□□ 0.73
NUBP1P53384 LINC01711-201ENST00000598340 967 ntBASIC19.61■□□□□ 0.73
NUBP1P53384 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
NUBP1P53384 IFNL4P1-201ENST00000607083 540 ntBASIC19.61■□□□□ 0.73
NUBP1P53384 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
NUBP1P53384 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NUBP1P53384 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUBP1P53384 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUBP1P53384 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.61■□□□□ 0.73
NUBP1P53384 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUBP1P53384 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUBP1P53384 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NUBP1P53384 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUBP1P53384 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NUBP1P53384 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUBP1P53384 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.6■□□□□ 0.73
NUBP1P53384 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NUBP1P53384 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUBP1P53384 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NUBP1P53384 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NUBP1P53384 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NUBP1P53384 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.6■□□□□ 0.73
NUBP1P53384 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.6■□□□□ 0.73
NUBP1P53384 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NUBP1P53384 BX276092.5-203ENST00000456199 560 ntBASIC19.6■□□□□ 0.73
NUBP1P53384 AP003041.3-201ENST00000527151 707 ntBASIC19.6■□□□□ 0.73
NUBP1P53384 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
NUBP1P53384 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NUBP1P53384 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.6■□□□□ 0.73
NUBP1P53384 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NUBP1P53384 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.6■□□□□ 0.73
NUBP1P53384 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.6■□□□□ 0.73
NUBP1P53384 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUBP1P53384 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NUBP1P53384 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.6■□□□□ 0.73
NUBP1P53384 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUBP1P53384 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NUBP1P53384 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUBP1P53384 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUBP1P53384 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUBP1P53384 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NUBP1P53384 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUBP1P53384 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NUBP1P53384 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms