Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.77■■□□□ 1.08
GPC3P51654 REXO1L12P-201ENST00000622156 912 ntBASIC21.77■■□□□ 1.08
GPC3P51654 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
GPC3P51654 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
GPC3P51654 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
GPC3P51654 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
GPC3P51654 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.77■■□□□ 1.07
GPC3P51654 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.77■■□□□ 1.07
GPC3P51654 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.77■■□□□ 1.07
GPC3P51654 AC099778.1-201ENST00000568593 1911 ntBASIC21.76■■□□□ 1.07
GPC3P51654 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GPC3P51654 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GPC3P51654 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.76■■□□□ 1.07
GPC3P51654 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
GPC3P51654 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.76■■□□□ 1.07
GPC3P51654 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GPC3P51654 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.76■■□□□ 1.07
GPC3P51654 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
GPC3P51654 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.76■■□□□ 1.07
GPC3P51654 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GPC3P51654 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.76■■□□□ 1.07
GPC3P51654 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.76■■□□□ 1.07
GPC3P51654 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.76■■□□□ 1.07
GPC3P51654 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
GPC3P51654 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GPC3P51654 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.76■■□□□ 1.07
GPC3P51654 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
GPC3P51654 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.76■■□□□ 1.07
GPC3P51654 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.76■■□□□ 1.07
GPC3P51654 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GPC3P51654 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
GPC3P51654 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.76■■□□□ 1.07
GPC3P51654 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.76■■□□□ 1.07
GPC3P51654 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GPC3P51654 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.75■■□□□ 1.07
GPC3P51654 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
GPC3P51654 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
GPC3P51654 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GPC3P51654 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GPC3P51654 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GPC3P51654 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GPC3P51654 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.75■■□□□ 1.07
GPC3P51654 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GPC3P51654 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.75■■□□□ 1.07
GPC3P51654 AP002982.1-201ENST00000492365 877 ntBASIC21.75■■□□□ 1.07
GPC3P51654 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.75■■□□□ 1.07
GPC3P51654 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.75■■□□□ 1.07
GPC3P51654 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GPC3P51654 PHGDH-210ENST00000641115 1638 ntBASIC21.75■■□□□ 1.07
GPC3P51654 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GPC3P51654 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GPC3P51654 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
GPC3P51654 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GPC3P51654 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
GPC3P51654 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GPC3P51654 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GPC3P51654 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
GPC3P51654 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GPC3P51654 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
GPC3P51654 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GPC3P51654 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
GPC3P51654 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.74■■□□□ 1.07
GPC3P51654 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.74■■□□□ 1.07
GPC3P51654 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GPC3P51654 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.74■■□□□ 1.07
GPC3P51654 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.74■■□□□ 1.07
GPC3P51654 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.74■■□□□ 1.07
GPC3P51654 AP003071.4-201ENST00000562276 1284 ntBASIC21.74■■□□□ 1.07
GPC3P51654 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.74■■□□□ 1.07
GPC3P51654 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.74■■□□□ 1.07
GPC3P51654 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.74■■□□□ 1.07
GPC3P51654 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.74■■□□□ 1.07
GPC3P51654 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.74■■□□□ 1.07
GPC3P51654 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.74■■□□□ 1.07
GPC3P51654 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GPC3P51654 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GPC3P51654 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
GPC3P51654 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GPC3P51654 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GPC3P51654 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.73■■□□□ 1.07
GPC3P51654 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.73■■□□□ 1.07
GPC3P51654 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.73■■□□□ 1.07
GPC3P51654 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
GPC3P51654 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
GPC3P51654 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GPC3P51654 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GPC3P51654 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
GPC3P51654 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
GPC3P51654 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
GPC3P51654 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GPC3P51654 AC211429.1-201ENST00000415277 523 ntBASIC21.73■■□□□ 1.07
GPC3P51654 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.73■■□□□ 1.07
GPC3P51654 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GPC3P51654 AL355355.2-201ENST00000442321 338 ntBASIC21.73■■□□□ 1.07
GPC3P51654 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GPC3P51654 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
GPC3P51654 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GPC3P51654 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.73■■□□□ 1.07
GPC3P51654 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
GPC3P51654 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms