Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.02■□□□□ 0.64
RAB28P51157 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB28P51157 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
RAB28P51157 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
RAB28P51157 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RAB28P51157 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB28P51157 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
RAB28P51157 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB28P51157 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.02■□□□□ 0.64
RAB28P51157 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
RAB28P51157 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB28P51157 KRT16P5-201ENST00000455284 522 ntBASIC19.02■□□□□ 0.64
RAB28P51157 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB28P51157 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.02■□□□□ 0.64
RAB28P51157 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.02■□□□□ 0.64
RAB28P51157 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.02■□□□□ 0.64
RAB28P51157 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.02■□□□□ 0.64
RAB28P51157 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.02■□□□□ 0.64
RAB28P51157 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.02■□□□□ 0.64
RAB28P51157 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.02■□□□□ 0.64
RAB28P51157 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RAB28P51157 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RAB28P51157 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RAB28P51157 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RAB28P51157 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RAB28P51157 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.02■□□□□ 0.63
RAB28P51157 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.02■□□□□ 0.63
RAB28P51157 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.02■□□□□ 0.63
RAB28P51157 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RAB28P51157 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB28P51157 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB28P51157 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB28P51157 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB28P51157 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.01■□□□□ 0.63
RAB28P51157 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.01■□□□□ 0.63
RAB28P51157 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.01■□□□□ 0.63
RAB28P51157 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB28P51157 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB28P51157 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB28P51157 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB28P51157 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.01■□□□□ 0.63
RAB28P51157 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB28P51157 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.01■□□□□ 0.63
RAB28P51157 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB28P51157 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.01■□□□□ 0.63
RAB28P51157 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB28P51157 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.01■□□□□ 0.63
RAB28P51157 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RAB28P51157 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.01■□□□□ 0.63
RAB28P51157 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.01■□□□□ 0.63
RAB28P51157 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.01■□□□□ 0.63
RAB28P51157 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.01■□□□□ 0.63
RAB28P51157 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.01■□□□□ 0.63
RAB28P51157 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.01■□□□□ 0.63
RAB28P51157 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB28P51157 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.01■□□□□ 0.63
RAB28P51157 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB28P51157 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.01■□□□□ 0.63
RAB28P51157 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB28P51157 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
RAB28P51157 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RAB28P51157 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.01■□□□□ 0.63
RAB28P51157 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB28P51157 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
RAB28P51157 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB28P51157 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19■□□□□ 0.63
RAB28P51157 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RAB28P51157 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB28P51157 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB28P51157 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB28P51157 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RAB28P51157 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB28P51157 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB28P51157 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB28P51157 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
RAB28P51157 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB28P51157 PCDHAC2-203ENST00000615316 3011 ntBASIC19■□□□□ 0.63
RAB28P51157 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB28P51157 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RAB28P51157 KRT18P16-201ENST00000510337 1294 ntBASIC19■□□□□ 0.63
RAB28P51157 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RAB28P51157 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19■□□□□ 0.63
RAB28P51157 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
RAB28P51157 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RAB28P51157 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19■□□□□ 0.63
RAB28P51157 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB28P51157 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19■□□□□ 0.63
RAB28P51157 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RAB28P51157 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB28P51157 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RAB28P51157 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19■□□□□ 0.63
RAB28P51157 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RAB28P51157 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RAB28P51157 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.99■□□□□ 0.63
RAB28P51157 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB28P51157 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB28P51157 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB28P51157 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.99■□□□□ 0.63
RAB28P51157 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAB28P51157 TUBB8P6-201ENST00000436895 1288 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms