Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.87■■□□□ 1.09
CPT1AP50416 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.87■■□□□ 1.09
CPT1AP50416 AC087388.1-201ENST00000571370 1112 ntBASIC21.87■■□□□ 1.09
CPT1AP50416 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
CPT1AP50416 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
CPT1AP50416 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CPT1AP50416 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPT1AP50416 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPT1AP50416 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPT1AP50416 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPT1AP50416 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
CPT1AP50416 AC096733.2-201ENST00000609937 1394 ntBASIC21.87■■□□□ 1.09
CPT1AP50416 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.86■■□□□ 1.09
CPT1AP50416 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.86■■□□□ 1.09
CPT1AP50416 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPT1AP50416 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
CPT1AP50416 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CPT1AP50416 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CPT1AP50416 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.86■■□□□ 1.09
CPT1AP50416 MFAP1P1-201ENST00000442257 1255 ntBASIC21.86■■□□□ 1.09
CPT1AP50416 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.86■■□□□ 1.09
CPT1AP50416 AC116562.4-202ENST00000641738 218 ntBASIC21.86■■□□□ 1.09
CPT1AP50416 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
CPT1AP50416 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.86■■□□□ 1.09
CPT1AP50416 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CPT1AP50416 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPT1AP50416 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CPT1AP50416 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPT1AP50416 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CPT1AP50416 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.85■■□□□ 1.09
CPT1AP50416 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPT1AP50416 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.85■■□□□ 1.09
CPT1AP50416 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CPT1AP50416 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPT1AP50416 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.85■■□□□ 1.09
CPT1AP50416 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPT1AP50416 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPT1AP50416 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CPT1AP50416 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPT1AP50416 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.85■■□□□ 1.09
CPT1AP50416 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CPT1AP50416 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
CPT1AP50416 HMGA1P5-201ENST00000412453 271 ntBASIC21.85■■□□□ 1.09
CPT1AP50416 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.85■■□□□ 1.09
CPT1AP50416 BX664615.1-201ENST00000443558 458 ntBASIC21.85■■□□□ 1.09
CPT1AP50416 CCR12P-201ENST00000446203 998 ntBASIC21.85■■□□□ 1.09
CPT1AP50416 AC008040.2-201ENST00000461049 708 ntBASIC21.85■■□□□ 1.09
CPT1AP50416 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.85■■□□□ 1.09
CPT1AP50416 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
CPT1AP50416 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPT1AP50416 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPT1AP50416 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPT1AP50416 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.84■■□□□ 1.09
CPT1AP50416 KRT8P8-201ENST00000434750 1448 ntBASIC21.84■■□□□ 1.09
CPT1AP50416 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPT1AP50416 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPT1AP50416 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPT1AP50416 INGX-201ENST00000359239 846 ntBASIC21.84■■□□□ 1.09
CPT1AP50416 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
CPT1AP50416 WWOX-216ENST00000569818 525 ntBASIC21.84■■□□□ 1.09
CPT1AP50416 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.84■■□□□ 1.09
CPT1AP50416 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CPT1AP50416 LINC00565-201ENST00000562710 2331 ntBASIC21.84■■□□□ 1.09
CPT1AP50416 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.83■■□□□ 1.09
CPT1AP50416 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPT1AP50416 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPT1AP50416 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CPT1AP50416 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CPT1AP50416 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPT1AP50416 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.83■■□□□ 1.09
CPT1AP50416 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CPT1AP50416 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CPT1AP50416 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CPT1AP50416 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPT1AP50416 SLC25A1P2-201ENST00000430693 912 ntBASIC21.83■■□□□ 1.09
CPT1AP50416 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.83■■□□□ 1.09
CPT1AP50416 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CPT1AP50416 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CPT1AP50416 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPT1AP50416 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.83■■□□□ 1.09
CPT1AP50416 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CPT1AP50416 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.83■■□□□ 1.08
CPT1AP50416 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
CPT1AP50416 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CPT1AP50416 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CPT1AP50416 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CPT1AP50416 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CPT1AP50416 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPT1AP50416 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPT1AP50416 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPT1AP50416 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CPT1AP50416 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPT1AP50416 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CPT1AP50416 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CPT1AP50416 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPT1AP50416 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPT1AP50416 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.82■■□□□ 1.08
CPT1AP50416 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CPT1AP50416 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
CPT1AP50416 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms