Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.41■□□□□ 0.38
SRP9P49458 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.41■□□□□ 0.38
SRP9P49458 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.41■□□□□ 0.38
SRP9P49458 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.41■□□□□ 0.38
SRP9P49458 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.41■□□□□ 0.38
SRP9P49458 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRP9P49458 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRP9P49458 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.41■□□□□ 0.38
SRP9P49458 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.41■□□□□ 0.38
SRP9P49458 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.41■□□□□ 0.38
SRP9P49458 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SRP9P49458 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRP9P49458 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SRP9P49458 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRP9P49458 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRP9P49458 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRP9P49458 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.4■□□□□ 0.38
SRP9P49458 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.4■□□□□ 0.38
SRP9P49458 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRP9P49458 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRP9P49458 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SRP9P49458 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.4■□□□□ 0.38
SRP9P49458 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SRP9P49458 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRP9P49458 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SRP9P49458 GPX1P1-201ENST00000388829 606 ntBASIC17.4■□□□□ 0.38
SRP9P49458 MCRIP2P1-201ENST00000394346 511 ntBASIC17.4■□□□□ 0.38
SRP9P49458 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.4■□□□□ 0.38
SRP9P49458 NCF1B-203ENST00000435988 1254 ntBASIC17.4■□□□□ 0.38
SRP9P49458 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.4■□□□□ 0.38
SRP9P49458 AC083906.2-201ENST00000511578 360 ntBASIC17.4■□□□□ 0.38
SRP9P49458 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.4■□□□□ 0.38
SRP9P49458 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.4■□□□□ 0.38
SRP9P49458 AL050303.2-201ENST00000619798 666 ntBASIC17.4■□□□□ 0.38
SRP9P49458 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SRP9P49458 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.4■□□□□ 0.38
SRP9P49458 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SRP9P49458 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.4■□□□□ 0.38
SRP9P49458 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.4■□□□□ 0.38
SRP9P49458 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRP9P49458 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SRP9P49458 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.39■□□□□ 0.38
SRP9P49458 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SRP9P49458 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.39■□□□□ 0.37
SRP9P49458 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRP9P49458 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRP9P49458 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SRP9P49458 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRP9P49458 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRP9P49458 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SRP9P49458 SLC29A4P1-201ENST00000398760 971 ntBASIC17.39■□□□□ 0.37
SRP9P49458 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.39■□□□□ 0.37
SRP9P49458 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.39■□□□□ 0.37
SRP9P49458 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SRP9P49458 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.39■□□□□ 0.37
SRP9P49458 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.39■□□□□ 0.37
SRP9P49458 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.39■□□□□ 0.37
SRP9P49458 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.39■□□□□ 0.37
SRP9P49458 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRP9P49458 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRP9P49458 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SRP9P49458 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRP9P49458 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SRP9P49458 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.39■□□□□ 0.37
SRP9P49458 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SRP9P49458 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRP9P49458 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
SRP9P49458 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRP9P49458 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRP9P49458 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SRP9P49458 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRP9P49458 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRP9P49458 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRP9P49458 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SRP9P49458 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SRP9P49458 MKRN4P-201ENST00000444706 1521 ntBASIC17.38■□□□□ 0.37
SRP9P49458 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
SRP9P49458 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.38■□□□□ 0.37
SRP9P49458 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRP9P49458 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
SRP9P49458 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.38■□□□□ 0.37
SRP9P49458 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SRP9P49458 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.38■□□□□ 0.37
SRP9P49458 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SRP9P49458 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRP9P49458 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRP9P49458 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRP9P49458 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.38■□□□□ 0.37
SRP9P49458 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SRP9P49458 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.38■□□□□ 0.37
SRP9P49458 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.38■□□□□ 0.37
SRP9P49458 AC010980.2-201ENST00000587099 1412 ntBASIC17.38■□□□□ 0.37
SRP9P49458 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRP9P49458 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRP9P49458 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRP9P49458 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.37■□□□□ 0.37
SRP9P49458 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SRP9P49458 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.37■□□□□ 0.37
SRP9P49458 AC005332.8-201ENST00000622750 2735 ntBASIC17.37■□□□□ 0.37
SRP9P49458 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms