Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.99■□□□□ 0.47
SLC9A3P48764 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.99■□□□□ 0.47
SLC9A3P48764 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.99■□□□□ 0.47
SLC9A3P48764 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC9A3P48764 AL589743.5-201ENST00000616611 1050 ntBASIC17.99■□□□□ 0.47
SLC9A3P48764 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC9A3P48764 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.99■□□□□ 0.47
SLC9A3P48764 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC9A3P48764 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC9A3P48764 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SLC9A3P48764 AP001271.2-201ENST00000624018 1556 ntBASIC17.99■□□□□ 0.47
SLC9A3P48764 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.99■□□□□ 0.47
SLC9A3P48764 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SLC9A3P48764 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
SLC9A3P48764 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC9A3P48764 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC9A3P48764 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC9A3P48764 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC9A3P48764 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SLC9A3P48764 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC9A3P48764 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SLC9A3P48764 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC9A3P48764 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.98■□□□□ 0.47
SLC9A3P48764 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC9A3P48764 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.98■□□□□ 0.47
SLC9A3P48764 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC9A3P48764 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC9A3P48764 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC9A3P48764 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC9A3P48764 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SLC9A3P48764 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.98■□□□□ 0.47
SLC9A3P48764 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SLC9A3P48764 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC9A3P48764 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC9A3P48764 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC9A3P48764 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC9A3P48764 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC9A3P48764 TREX1-205ENST00000625293 1783 ntBASIC17.97■□□□□ 0.47
SLC9A3P48764 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC9A3P48764 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
SLC9A3P48764 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC9A3P48764 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC9A3P48764 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC9A3P48764 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC9A3P48764 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC9A3P48764 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC9A3P48764 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC9A3P48764 AL512625.2-201ENST00000417533 625 ntBASIC17.97■□□□□ 0.47
SLC9A3P48764 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC9A3P48764 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC9A3P48764 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC9A3P48764 AC023632.3-201ENST00000521633 145 ntBASIC17.97■□□□□ 0.47
SLC9A3P48764 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC9A3P48764 MIR5787-201ENST00000611784 55 ntBASIC17.97■□□□□ 0.47
SLC9A3P48764 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC9A3P48764 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SLC9A3P48764 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC9A3P48764 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC9A3P48764 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC9A3P48764 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC9A3P48764 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC9A3P48764 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SLC9A3P48764 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
SLC9A3P48764 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC9A3P48764 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC9A3P48764 AC010980.2-201ENST00000587099 1412 ntBASIC17.97■□□□□ 0.47
SLC9A3P48764 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC9A3P48764 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC9A3P48764 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC9A3P48764 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC9A3P48764 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC9A3P48764 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC9A3P48764 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC9A3P48764 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC9A3P48764 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC9A3P48764 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC9A3P48764 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC9A3P48764 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC9A3P48764 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC9A3P48764 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.96■□□□□ 0.47
SLC9A3P48764 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC9A3P48764 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC9A3P48764 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC9A3P48764 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC9A3P48764 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
SLC9A3P48764 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.46
SLC9A3P48764 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SLC9A3P48764 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC9A3P48764 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC9A3P48764 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC9A3P48764 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.95■□□□□ 0.46
SLC9A3P48764 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC9A3P48764 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC9A3P48764 AL162430.1-201ENST00000480705 870 ntBASIC17.95■□□□□ 0.46
SLC9A3P48764 C2orf69P4-201ENST00000565394 541 ntBASIC17.95■□□□□ 0.46
SLC9A3P48764 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
SLC9A3P48764 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.95■□□□□ 0.46
SLC9A3P48764 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC9A3P48764 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SLC9A3P48764 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms