Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
COL15A1P39059 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL15A1P39059 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL15A1P39059 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC25.03■■□□□ 1.6
COL15A1P39059 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC25.03■■□□□ 1.6
COL15A1P39059 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC25.03■■□□□ 1.6
COL15A1P39059 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL15A1P39059 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL15A1P39059 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC25.02■■□□□ 1.6
COL15A1P39059 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC25.02■■□□□ 1.6
COL15A1P39059 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL15A1P39059 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL15A1P39059 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC25.02■■□□□ 1.6
COL15A1P39059 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL15A1P39059 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC25.01■■□□□ 1.6
COL15A1P39059 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL15A1P39059 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL15A1P39059 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC25.01■■□□□ 1.59
COL15A1P39059 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL15A1P39059 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC25.01■■□□□ 1.59
COL15A1P39059 GUK1-204ENST00000366721 689 ntTSL 3 BASIC25.01■■□□□ 1.59
COL15A1P39059 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC25.01■■□□□ 1.59
COL15A1P39059 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC25.01■■□□□ 1.59
COL15A1P39059 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC25.01■■□□□ 1.59
COL15A1P39059 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
COL15A1P39059 HLA-A-209ENST00000638375 975 ntBASIC25.01■■□□□ 1.59
COL15A1P39059 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC25.01■■□□□ 1.59
COL15A1P39059 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC25■■□□□ 1.59
COL15A1P39059 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC25■■□□□ 1.59
COL15A1P39059 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL15A1P39059 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
COL15A1P39059 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
COL15A1P39059 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL15A1P39059 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC25■■□□□ 1.59
COL15A1P39059 AK4P3-201ENST00000418260 669 ntBASIC25■■□□□ 1.59
COL15A1P39059 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
COL15A1P39059 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC25■■□□□ 1.59
COL15A1P39059 SLC25A1P4-201ENST00000567977 778 ntBASIC25■■□□□ 1.59
COL15A1P39059 AP000692.2-201ENST00000608391 879 ntBASIC25■■□□□ 1.59
COL15A1P39059 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
COL15A1P39059 PHGDH-210ENST00000641115 1638 ntBASIC25■■□□□ 1.59
COL15A1P39059 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL15A1P39059 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC25■■□□□ 1.59
COL15A1P39059 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL15A1P39059 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL15A1P39059 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC24.99■■□□□ 1.59
COL15A1P39059 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL15A1P39059 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL15A1P39059 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
COL15A1P39059 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC24.99■■□□□ 1.59
COL15A1P39059 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC24.99■■□□□ 1.59
COL15A1P39059 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL15A1P39059 AC011298.2-201ENST00000617989 482 ntBASIC24.99■■□□□ 1.59
COL15A1P39059 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL15A1P39059 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
COL15A1P39059 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL15A1P39059 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL15A1P39059 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC24.99■■□□□ 1.59
COL15A1P39059 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL15A1P39059 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL15A1P39059 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC24.99■■□□□ 1.59
COL15A1P39059 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
COL15A1P39059 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL15A1P39059 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
COL15A1P39059 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
COL15A1P39059 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL15A1P39059 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL15A1P39059 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL15A1P39059 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL15A1P39059 AC117947.1-201ENST00000427448 529 ntBASIC24.98■■□□□ 1.59
COL15A1P39059 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC24.98■■□□□ 1.59
COL15A1P39059 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC24.98■■□□□ 1.59
COL15A1P39059 AC063952.2-201ENST00000498792 1227 ntBASIC24.98■■□□□ 1.59
COL15A1P39059 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC24.98■■□□□ 1.59
COL15A1P39059 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
COL15A1P39059 AC096733.2-201ENST00000609937 1394 ntBASIC24.98■■□□□ 1.59
COL15A1P39059 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL15A1P39059 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL15A1P39059 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL15A1P39059 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
COL15A1P39059 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL15A1P39059 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
COL15A1P39059 USP48-205ENST00000421625 2818 ntTSL 2 BASIC24.97■■□□□ 1.59
COL15A1P39059 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL15A1P39059 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
COL15A1P39059 HMGA1P5-201ENST00000412453 271 ntBASIC24.97■■□□□ 1.59
COL15A1P39059 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC24.97■■□□□ 1.59
COL15A1P39059 AC008040.2-201ENST00000461049 708 ntBASIC24.97■■□□□ 1.59
COL15A1P39059 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC24.97■■□□□ 1.59
COL15A1P39059 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC24.97■■□□□ 1.59
COL15A1P39059 MYC-208ENST00000641036 567 ntBASIC24.97■■□□□ 1.59
COL15A1P39059 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
COL15A1P39059 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL15A1P39059 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC24.97■■□□□ 1.59
COL15A1P39059 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC24.97■■□□□ 1.59
COL15A1P39059 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC24.97■■□□□ 1.59
COL15A1P39059 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
COL15A1P39059 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL15A1P39059 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
COL15A1P39059 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms