Protein–RNA interactions for Protein: P35250

RFC2, Replication factor C subunit 2, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2P35250 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.4■■□□□ 1.02
RFC2P35250 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.4■■□□□ 1.02
RFC2P35250 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RFC2P35250 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFC2P35250 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.4■■□□□ 1.02
RFC2P35250 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFC2P35250 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.4■■□□□ 1.02
RFC2P35250 PHGDH-210ENST00000641115 1638 ntBASIC21.4■■□□□ 1.02
RFC2P35250 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RFC2P35250 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RFC2P35250 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RFC2P35250 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFC2P35250 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFC2P35250 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFC2P35250 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.39■■□□□ 1.01
RFC2P35250 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.39■■□□□ 1.01
RFC2P35250 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RFC2P35250 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFC2P35250 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFC2P35250 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.39■■□□□ 1.01
RFC2P35250 KRT126P-201ENST00000549467 1181 ntBASIC21.39■■□□□ 1.01
RFC2P35250 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
RFC2P35250 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.39■■□□□ 1.01
RFC2P35250 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.39■■□□□ 1.01
RFC2P35250 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.39■■□□□ 1.01
RFC2P35250 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFC2P35250 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
RFC2P35250 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFC2P35250 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFC2P35250 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFC2P35250 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFC2P35250 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.39■■□□□ 1.01
RFC2P35250 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RFC2P35250 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFC2P35250 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFC2P35250 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.38■■□□□ 1.01
RFC2P35250 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFC2P35250 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RFC2P35250 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.38■■□□□ 1.01
RFC2P35250 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFC2P35250 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RFC2P35250 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RFC2P35250 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.38■■□□□ 1.01
RFC2P35250 HOMER2P1-201ENST00000455653 964 ntBASIC21.38■■□□□ 1.01
RFC2P35250 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.38■■□□□ 1.01
RFC2P35250 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFC2P35250 AL023803.3-201ENST00000615559 522 ntBASIC21.38■■□□□ 1.01
RFC2P35250 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.38■■□□□ 1.01
RFC2P35250 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
RFC2P35250 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.38■■□□□ 1.01
RFC2P35250 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFC2P35250 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFC2P35250 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFC2P35250 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFC2P35250 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFC2P35250 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFC2P35250 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFC2P35250 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RFC2P35250 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFC2P35250 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RFC2P35250 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RFC2P35250 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RFC2P35250 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.37■■□□□ 1.01
RFC2P35250 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.37■■□□□ 1.01
RFC2P35250 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.37■■□□□ 1.01
RFC2P35250 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.37■■□□□ 1.01
RFC2P35250 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFC2P35250 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.37■■□□□ 1.01
RFC2P35250 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFC2P35250 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.37■■□□□ 1.01
RFC2P35250 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFC2P35250 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFC2P35250 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RFC2P35250 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RFC2P35250 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFC2P35250 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFC2P35250 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RFC2P35250 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFC2P35250 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.36■■□□□ 1.01
RFC2P35250 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RFC2P35250 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RFC2P35250 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFC2P35250 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.36■■□□□ 1.01
RFC2P35250 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFC2P35250 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFC2P35250 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.36■■□□□ 1.01
RFC2P35250 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
RFC2P35250 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.36■■□□□ 1.01
RFC2P35250 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.36■■□□□ 1.01
RFC2P35250 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.36■■□□□ 1.01
RFC2P35250 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.36■■□□□ 1.01
RFC2P35250 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.36■■□□□ 1.01
RFC2P35250 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.36■■□□□ 1.01
RFC2P35250 AC011558.1-201ENST00000623459 338 ntBASIC21.36■■□□□ 1.01
RFC2P35250 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RFC2P35250 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.36■■□□□ 1.01
RFC2P35250 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.36■■□□□ 1.01
RFC2P35250 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.36■■□□□ 1.01
RFC2P35250 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RFC2P35250 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms