Protein–RNA interactions for Protein: P30926

CHRNB4, Neuronal acetylcholine receptor subunit beta-4, humanhuman

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4P30926 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNB4P30926 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CHRNB4P30926 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.44■□□□□ 0.38
CHRNB4P30926 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CHRNB4P30926 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRNB4P30926 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRNB4P30926 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.44■□□□□ 0.38
CHRNB4P30926 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNB4P30926 C2orf69P3-201ENST00000565542 1120 ntBASIC17.44■□□□□ 0.38
CHRNB4P30926 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRNB4P30926 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNB4P30926 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNB4P30926 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNB4P30926 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CHRNB4P30926 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNB4P30926 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNB4P30926 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CHRNB4P30926 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNB4P30926 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.43■□□□□ 0.38
CHRNB4P30926 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNB4P30926 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.43■□□□□ 0.38
CHRNB4P30926 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.43■□□□□ 0.38
CHRNB4P30926 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.43■□□□□ 0.38
CHRNB4P30926 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.43■□□□□ 0.38
CHRNB4P30926 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
CHRNB4P30926 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.43■□□□□ 0.38
CHRNB4P30926 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.43■□□□□ 0.38
CHRNB4P30926 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.43■□□□□ 0.38
CHRNB4P30926 DGCR10-201ENST00000609839 495 ntBASIC17.43■□□□□ 0.38
CHRNB4P30926 KRT16P6-202ENST00000425692 1426 ntBASIC17.43■□□□□ 0.38
CHRNB4P30926 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNB4P30926 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CHRNB4P30926 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNB4P30926 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNB4P30926 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.43■□□□□ 0.38
CHRNB4P30926 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNB4P30926 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNB4P30926 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CHRNB4P30926 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CHRNB4P30926 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB4P30926 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB4P30926 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB4P30926 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CHRNB4P30926 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB4P30926 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
CHRNB4P30926 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.42■□□□□ 0.38
CHRNB4P30926 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB4P30926 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB4P30926 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB4P30926 YBX1P10-201ENST00000444752 975 ntBASIC17.42■□□□□ 0.38
CHRNB4P30926 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB4P30926 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB4P30926 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.42■□□□□ 0.38
CHRNB4P30926 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.42■□□□□ 0.38
CHRNB4P30926 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CHRNB4P30926 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.41■□□□□ 0.38
CHRNB4P30926 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB4P30926 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CHRNB4P30926 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB4P30926 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB4P30926 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CHRNB4P30926 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CHRNB4P30926 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB4P30926 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB4P30926 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.41■□□□□ 0.38
CHRNB4P30926 LIN28AP1-201ENST00000429574 405 ntBASIC17.41■□□□□ 0.38
CHRNB4P30926 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRNB4P30926 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
CHRNB4P30926 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB4P30926 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRNB4P30926 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CHRNB4P30926 AP005242.2-201ENST00000580065 1175 ntBASIC17.41■□□□□ 0.38
CHRNB4P30926 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB4P30926 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB4P30926 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRNB4P30926 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB4P30926 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CHRNB4P30926 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB4P30926 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
CHRNB4P30926 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CHRNB4P30926 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.41■□□□□ 0.38
CHRNB4P30926 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CHRNB4P30926 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CHRNB4P30926 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNB4P30926 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNB4P30926 AC116351.2-201ENST00000606540 1585 ntBASIC17.4■□□□□ 0.38
CHRNB4P30926 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNB4P30926 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNB4P30926 AC073508.3-201ENST00000619697 1419 ntBASIC17.4■□□□□ 0.38
CHRNB4P30926 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNB4P30926 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNB4P30926 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CHRNB4P30926 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CHRNB4P30926 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.4■□□□□ 0.38
CHRNB4P30926 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CHRNB4P30926 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.4■□□□□ 0.38
CHRNB4P30926 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.4■□□□□ 0.38
CHRNB4P30926 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNB4P30926 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHRNB4P30926 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms