Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
GDF1P27539 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GDF1P27539 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
GDF1P27539 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
GDF1P27539 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
GDF1P27539 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GDF1P27539 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDF1P27539 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDF1P27539 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDF1P27539 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GDF1P27539 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.84■□□□□ 0.45
GDF1P27539 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDF1P27539 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
GDF1P27539 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
GDF1P27539 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDF1P27539 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDF1P27539 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
GDF1P27539 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDF1P27539 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDF1P27539 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDF1P27539 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.84■□□□□ 0.45
GDF1P27539 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
GDF1P27539 KRT17P2-201ENST00000300992 1314 ntBASIC17.84■□□□□ 0.45
GDF1P27539 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.84■□□□□ 0.45
GDF1P27539 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
GDF1P27539 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
GDF1P27539 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.84■□□□□ 0.45
GDF1P27539 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.84■□□□□ 0.45
GDF1P27539 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.84■□□□□ 0.45
GDF1P27539 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.84■□□□□ 0.45
GDF1P27539 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.84■□□□□ 0.45
GDF1P27539 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.84■□□□□ 0.45
GDF1P27539 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.84■□□□□ 0.45
GDF1P27539 MIR4785-201ENST00000585005 73 ntBASIC17.84■□□□□ 0.45
GDF1P27539 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GDF1P27539 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.84■□□□□ 0.45
GDF1P27539 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDF1P27539 LINC01006-201ENST00000333319 2292 ntBASIC17.84■□□□□ 0.45
GDF1P27539 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDF1P27539 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDF1P27539 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.84■□□□□ 0.45
GDF1P27539 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.83■□□□□ 0.45
GDF1P27539 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GDF1P27539 AP001271.2-201ENST00000624018 1556 ntBASIC17.83■□□□□ 0.45
GDF1P27539 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
GDF1P27539 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GDF1P27539 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.83■□□□□ 0.45
GDF1P27539 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GDF1P27539 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
GDF1P27539 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
GDF1P27539 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.83■□□□□ 0.45
GDF1P27539 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDF1P27539 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDF1P27539 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
GDF1P27539 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDF1P27539 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDF1P27539 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDF1P27539 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
GDF1P27539 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.83■□□□□ 0.44
GDF1P27539 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.83■□□□□ 0.44
GDF1P27539 TUBB8P6-201ENST00000436895 1288 ntBASIC17.83■□□□□ 0.44
GDF1P27539 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.83■□□□□ 0.44
GDF1P27539 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.83■□□□□ 0.44
GDF1P27539 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.83■□□□□ 0.44
GDF1P27539 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.83■□□□□ 0.44
GDF1P27539 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.83■□□□□ 0.44
GDF1P27539 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDF1P27539 AL157384.1-201ENST00000445995 2473 ntBASIC17.83■□□□□ 0.44
GDF1P27539 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDF1P27539 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDF1P27539 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
GDF1P27539 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GDF1P27539 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GDF1P27539 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
GDF1P27539 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDF1P27539 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDF1P27539 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.82■□□□□ 0.44
GDF1P27539 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.82■□□□□ 0.44
GDF1P27539 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDF1P27539 AL162377.1-201ENST00000618844 1793 ntBASIC17.82■□□□□ 0.44
GDF1P27539 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.82■□□□□ 0.44
GDF1P27539 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDF1P27539 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
GDF1P27539 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GDF1P27539 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDF1P27539 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GDF1P27539 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.82■□□□□ 0.44
GDF1P27539 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.82■□□□□ 0.44
GDF1P27539 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
GDF1P27539 CD177P1-201ENST00000606252 935 ntBASIC17.82■□□□□ 0.44
GDF1P27539 AC073195.1-201ENST00000607241 877 ntBASIC17.82■□□□□ 0.44
GDF1P27539 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.82■□□□□ 0.44
GDF1P27539 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDF1P27539 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
GDF1P27539 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDF1P27539 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.82■□□□□ 0.44
GDF1P27539 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GDF1P27539 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GDF1P27539 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GDF1P27539 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms