Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PTPN3P26045 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.08■□□□□ 0.8
PTPN3P26045 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTPN3P26045 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PTPN3P26045 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTPN3P26045 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTPN3P26045 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN3P26045 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.07■□□□□ 0.8
PTPN3P26045 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN3P26045 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PTPN3P26045 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.07■□□□□ 0.8
PTPN3P26045 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.07■□□□□ 0.8
PTPN3P26045 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN3P26045 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN3P26045 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN3P26045 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN3P26045 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.07■□□□□ 0.8
PTPN3P26045 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN3P26045 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.07■□□□□ 0.8
PTPN3P26045 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.07■□□□□ 0.8
PTPN3P26045 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PTPN3P26045 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PTPN3P26045 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.07■□□□□ 0.8
PTPN3P26045 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN3P26045 AC120498.8-201ENST00000614275 531 ntBASIC20.07■□□□□ 0.8
PTPN3P26045 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PTPN3P26045 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN3P26045 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.07■□□□□ 0.8
PTPN3P26045 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN3P26045 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PTPN3P26045 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN3P26045 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPN3P26045 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.07■□□□□ 0.8
PTPN3P26045 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN3P26045 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PTPN3P26045 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN3P26045 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN3P26045 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PTPN3P26045 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN3P26045 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPN3P26045 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN3P26045 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN3P26045 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN3P26045 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN3P26045 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.06■□□□□ 0.8
PTPN3P26045 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.06■□□□□ 0.8
PTPN3P26045 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.06■□□□□ 0.8
PTPN3P26045 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN3P26045 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN3P26045 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN3P26045 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPN3P26045 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
PTPN3P26045 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN3P26045 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PTPN3P26045 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN3P26045 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN3P26045 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPN3P26045 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN3P26045 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN3P26045 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PTPN3P26045 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN3P26045 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN3P26045 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN3P26045 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN3P26045 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN3P26045 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPN3P26045 AC008687.6-201ENST00000596318 630 ntBASIC20.05■□□□□ 0.8
PTPN3P26045 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.05■□□□□ 0.8
PTPN3P26045 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
PTPN3P26045 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPN3P26045 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.05■□□□□ 0.8
PTPN3P26045 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PTPN3P26045 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN3P26045 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPN3P26045 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN3P26045 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN3P26045 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN3P26045 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PTPN3P26045 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN3P26045 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN3P26045 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.04■□□□□ 0.8
PTPN3P26045 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPN3P26045 UNC93B4-201ENST00000505679 747 ntBASIC20.04■□□□□ 0.8
PTPN3P26045 UNC93B5-201ENST00000530315 699 ntBASIC20.04■□□□□ 0.8
PTPN3P26045 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.04■□□□□ 0.8
PTPN3P26045 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PTPN3P26045 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN3P26045 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.04■□□□□ 0.8
PTPN3P26045 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPN3P26045 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN3P26045 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
PTPN3P26045 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN3P26045 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN3P26045 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN3P26045 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN3P26045 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPN3P26045 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PTPN3P26045 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
PTPN3P26045 AC093484.2-201ENST00000580996 2166 ntBASIC20.03■□□□□ 0.8
PTPN3P26045 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms