Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF1P18846 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF1P18846 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF1P18846 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.26■□□□□ 0.35
ATF1P18846 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.26■□□□□ 0.35
ATF1P18846 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.26■□□□□ 0.35
ATF1P18846 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.26■□□□□ 0.35
ATF1P18846 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATF1P18846 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATF1P18846 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATF1P18846 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.26■□□□□ 0.35
ATF1P18846 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.26■□□□□ 0.35
ATF1P18846 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.26■□□□□ 0.35
ATF1P18846 AC016405.3-201ENST00000607710 860 ntBASIC17.26■□□□□ 0.35
ATF1P18846 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATF1P18846 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
ATF1P18846 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF1P18846 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF1P18846 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.26■□□□□ 0.35
ATF1P18846 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF1P18846 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF1P18846 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ATF1P18846 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ATF1P18846 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATF1P18846 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ATF1P18846 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ATF1P18846 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATF1P18846 AC137761.2-201ENST00000561729 223 ntBASIC17.25■□□□□ 0.35
ATF1P18846 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATF1P18846 AC145350.3-201ENST00000569033 163 ntBASIC17.25■□□□□ 0.35
ATF1P18846 MIR6821-201ENST00000617625 74 ntBASIC17.25■□□□□ 0.35
ATF1P18846 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
ATF1P18846 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATF1P18846 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.25■□□□□ 0.35
ATF1P18846 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATF1P18846 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ATF1P18846 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATF1P18846 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ATF1P18846 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ATF1P18846 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.25■□□□□ 0.35
ATF1P18846 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.24■□□□□ 0.35
ATF1P18846 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
ATF1P18846 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATF1P18846 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATF1P18846 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATF1P18846 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ATF1P18846 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ATF1P18846 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.24■□□□□ 0.35
ATF1P18846 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATF1P18846 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATF1P18846 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
ATF1P18846 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.24■□□□□ 0.35
ATF1P18846 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATF1P18846 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.24■□□□□ 0.35
ATF1P18846 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATF1P18846 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ATF1P18846 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ATF1P18846 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ATF1P18846 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATF1P18846 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.24■□□□□ 0.35
ATF1P18846 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ATF1P18846 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.23■□□□□ 0.35
ATF1P18846 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATF1P18846 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATF1P18846 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATF1P18846 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ATF1P18846 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.23■□□□□ 0.35
ATF1P18846 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATF1P18846 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
ATF1P18846 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.23■□□□□ 0.35
ATF1P18846 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.23■□□□□ 0.35
ATF1P18846 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ATF1P18846 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.23■□□□□ 0.35
ATF1P18846 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.23■□□□□ 0.35
ATF1P18846 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.23■□□□□ 0.35
ATF1P18846 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.23■□□□□ 0.35
ATF1P18846 AC087623.3-201ENST00000607047 1098 ntBASIC17.23■□□□□ 0.35
ATF1P18846 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ATF1P18846 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
ATF1P18846 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATF1P18846 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATF1P18846 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATF1P18846 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATF1P18846 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATF1P18846 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ATF1P18846 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.22■□□□□ 0.35
ATF1P18846 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
ATF1P18846 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.22■□□□□ 0.35
ATF1P18846 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATF1P18846 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.22■□□□□ 0.35
ATF1P18846 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATF1P18846 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATF1P18846 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATF1P18846 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATF1P18846 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.22■□□□□ 0.35
ATF1P18846 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.22■□□□□ 0.35
ATF1P18846 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ATF1P18846 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ATF1P18846 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
ATF1P18846 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms