Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
VCANP13611 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VCANP13611 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.45■□□□□ 0.86
VCANP13611 AC112907.2-201ENST00000448639 330 ntBASIC20.45■□□□□ 0.86
VCANP13611 AC023632.3-201ENST00000521633 145 ntBASIC20.45■□□□□ 0.86
VCANP13611 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
VCANP13611 AC055717.3-201ENST00000622967 595 ntBASIC20.45■□□□□ 0.86
VCANP13611 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
VCANP13611 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.45■□□□□ 0.86
VCANP13611 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
VCANP13611 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
VCANP13611 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.45■□□□□ 0.86
VCANP13611 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.45■□□□□ 0.86
VCANP13611 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VCANP13611 NUS1P1-201ENST00000446295 882 ntBASIC20.45■□□□□ 0.86
VCANP13611 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.45■□□□□ 0.86
VCANP13611 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.44■□□□□ 0.86
VCANP13611 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
VCANP13611 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VCANP13611 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
VCANP13611 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VCANP13611 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
VCANP13611 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VCANP13611 GCSHP2-201ENST00000560971 527 ntBASIC20.44■□□□□ 0.86
VCANP13611 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.44■□□□□ 0.86
VCANP13611 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
VCANP13611 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VCANP13611 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
VCANP13611 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.44■□□□□ 0.86
VCANP13611 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.44■□□□□ 0.86
VCANP13611 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.44■□□□□ 0.86
VCANP13611 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
VCANP13611 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.44■□□□□ 0.86
VCANP13611 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.44■□□□□ 0.86
VCANP13611 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
VCANP13611 AP002414.4-201ENST00000589764 1148 ntBASIC20.44■□□□□ 0.86
VCANP13611 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VCANP13611 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VCANP13611 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VCANP13611 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VCANP13611 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VCANP13611 BX119927.1-201ENST00000636596 1552 ntBASIC20.43■□□□□ 0.86
VCANP13611 AP000523.1-201ENST00000398242 1049 ntBASIC20.43■□□□□ 0.86
VCANP13611 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VCANP13611 KRT18P31-201ENST00000506277 1292 ntBASIC20.43■□□□□ 0.86
VCANP13611 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
VCANP13611 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.43■□□□□ 0.86
VCANP13611 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.43■□□□□ 0.86
VCANP13611 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VCANP13611 AC011498.5-201ENST00000592027 486 ntBASIC20.43■□□□□ 0.86
VCANP13611 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VCANP13611 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.43■□□□□ 0.86
VCANP13611 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VCANP13611 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
VCANP13611 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
VCANP13611 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.43■□□□□ 0.86
VCANP13611 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.43■□□□□ 0.86
VCANP13611 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VCANP13611 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VCANP13611 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.43■□□□□ 0.86
VCANP13611 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VCANP13611 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.43■□□□□ 0.86
VCANP13611 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.42■□□□□ 0.86
VCANP13611 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VCANP13611 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
VCANP13611 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VCANP13611 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VCANP13611 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VCANP13611 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VCANP13611 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.42■□□□□ 0.86
VCANP13611 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.42■□□□□ 0.86
VCANP13611 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.42■□□□□ 0.86
VCANP13611 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
VCANP13611 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.42■□□□□ 0.86
VCANP13611 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VCANP13611 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
VCANP13611 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VCANP13611 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VCANP13611 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VCANP13611 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VCANP13611 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.42■□□□□ 0.86
VCANP13611 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
VCANP13611 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.42■□□□□ 0.86
VCANP13611 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.42■□□□□ 0.86
VCANP13611 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VCANP13611 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
VCANP13611 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VCANP13611 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
VCANP13611 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.41■□□□□ 0.86
VCANP13611 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VCANP13611 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.41■□□□□ 0.86
VCANP13611 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.41■□□□□ 0.86
VCANP13611 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.41■□□□□ 0.86
VCANP13611 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VCANP13611 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VCANP13611 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
VCANP13611 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
VCANP13611 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.41■□□□□ 0.86
VCANP13611 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
VCANP13611 AC127496.7-201ENST00000625110 1798 ntBASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms