Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBCP0CG48 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBCP0CG48 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBCP0CG48 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBCP0CG48 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.23■□□□□ 0.35
UBCP0CG48 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
UBCP0CG48 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.23■□□□□ 0.35
UBCP0CG48 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.23■□□□□ 0.35
UBCP0CG48 AC023632.3-201ENST00000521633 145 ntBASIC17.23■□□□□ 0.35
UBCP0CG48 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.23■□□□□ 0.35
UBCP0CG48 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.23■□□□□ 0.35
UBCP0CG48 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.23■□□□□ 0.35
UBCP0CG48 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.23■□□□□ 0.35
UBCP0CG48 AL589743.5-201ENST00000616611 1050 ntBASIC17.23■□□□□ 0.35
UBCP0CG48 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.23■□□□□ 0.35
UBCP0CG48 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBCP0CG48 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBCP0CG48 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBCP0CG48 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBCP0CG48 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.23■□□□□ 0.35
UBCP0CG48 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBCP0CG48 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBCP0CG48 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBCP0CG48 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.22■□□□□ 0.35
UBCP0CG48 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBCP0CG48 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBCP0CG48 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBCP0CG48 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
UBCP0CG48 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBCP0CG48 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBCP0CG48 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBCP0CG48 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBCP0CG48 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBCP0CG48 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBCP0CG48 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.22■□□□□ 0.35
UBCP0CG48 KRT18P5-201ENST00000436075 1291 ntBASIC17.22■□□□□ 0.35
UBCP0CG48 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.22■□□□□ 0.35
UBCP0CG48 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBCP0CG48 AC087623.3-201ENST00000607047 1098 ntBASIC17.22■□□□□ 0.35
UBCP0CG48 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.22■□□□□ 0.35
UBCP0CG48 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.22■□□□□ 0.35
UBCP0CG48 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
UBCP0CG48 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
UBCP0CG48 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.22■□□□□ 0.35
UBCP0CG48 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.22■□□□□ 0.35
UBCP0CG48 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.22■□□□□ 0.35
UBCP0CG48 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBCP0CG48 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.22■□□□□ 0.35
UBCP0CG48 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBCP0CG48 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
UBCP0CG48 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBCP0CG48 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.22■□□□□ 0.35
UBCP0CG48 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
UBCP0CG48 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
UBCP0CG48 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBCP0CG48 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBCP0CG48 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBCP0CG48 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.21■□□□□ 0.35
UBCP0CG48 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBCP0CG48 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBCP0CG48 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBCP0CG48 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
UBCP0CG48 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBCP0CG48 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBCP0CG48 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
UBCP0CG48 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBCP0CG48 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
UBCP0CG48 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.21■□□□□ 0.35
UBCP0CG48 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBCP0CG48 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBCP0CG48 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.21■□□□□ 0.35
UBCP0CG48 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBCP0CG48 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.21■□□□□ 0.35
UBCP0CG48 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBCP0CG48 AC011767.1-201ENST00000617410 1153 ntBASIC17.21■□□□□ 0.35
UBCP0CG48 AC231657.2-201ENST00000624556 255 ntBASIC17.21■□□□□ 0.35
UBCP0CG48 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBCP0CG48 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBCP0CG48 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.21■□□□□ 0.35
UBCP0CG48 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.21■□□□□ 0.35
UBCP0CG48 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBCP0CG48 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
UBCP0CG48 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
UBCP0CG48 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
UBCP0CG48 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
UBCP0CG48 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
UBCP0CG48 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBCP0CG48 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
UBCP0CG48 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBCP0CG48 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
UBCP0CG48 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.2■□□□□ 0.34
UBCP0CG48 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBCP0CG48 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
UBCP0CG48 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBCP0CG48 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.2■□□□□ 0.34
UBCP0CG48 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
UBCP0CG48 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBCP0CG48 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.2■□□□□ 0.34
UBCP0CG48 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBCP0CG48 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms