Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
FAM228BP0C875 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
FAM228BP0C875 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
FAM228BP0C875 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
FAM228BP0C875 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
FAM228BP0C875 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FAM228BP0C875 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
FAM228BP0C875 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FAM228BP0C875 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FAM228BP0C875 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.98■□□□□ 0.95
FAM228BP0C875 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FAM228BP0C875 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.98■□□□□ 0.95
FAM228BP0C875 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FAM228BP0C875 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FAM228BP0C875 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FAM228BP0C875 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
FAM228BP0C875 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FAM228BP0C875 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
FAM228BP0C875 AC116351.2-201ENST00000606540 1585 ntBASIC20.97■□□□□ 0.95
FAM228BP0C875 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM228BP0C875 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM228BP0C875 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM228BP0C875 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM228BP0C875 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM228BP0C875 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM228BP0C875 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
FAM228BP0C875 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM228BP0C875 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.97■□□□□ 0.95
FAM228BP0C875 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.97■□□□□ 0.95
FAM228BP0C875 CDCA4P2-201ENST00000441182 718 ntBASIC20.97■□□□□ 0.95
FAM228BP0C875 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.97■□□□□ 0.95
FAM228BP0C875 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.97■□□□□ 0.95
FAM228BP0C875 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM228BP0C875 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.97■□□□□ 0.95
FAM228BP0C875 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.97■□□□□ 0.95
FAM228BP0C875 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
FAM228BP0C875 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM228BP0C875 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM228BP0C875 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FAM228BP0C875 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM228BP0C875 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM228BP0C875 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM228BP0C875 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FAM228BP0C875 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.96■□□□□ 0.95
FAM228BP0C875 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.96■□□□□ 0.95
FAM228BP0C875 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FAM228BP0C875 MKRN4P-201ENST00000444706 1521 ntBASIC20.96■□□□□ 0.95
FAM228BP0C875 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM228BP0C875 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.96■□□□□ 0.95
FAM228BP0C875 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.96■□□□□ 0.95
FAM228BP0C875 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.96■□□□□ 0.95
FAM228BP0C875 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
FAM228BP0C875 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FAM228BP0C875 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.96■□□□□ 0.95
FAM228BP0C875 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.96■□□□□ 0.95
FAM228BP0C875 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM228BP0C875 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.96■□□□□ 0.95
FAM228BP0C875 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FAM228BP0C875 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM228BP0C875 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.96■□□□□ 0.95
FAM228BP0C875 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.96■□□□□ 0.95
FAM228BP0C875 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FAM228BP0C875 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FAM228BP0C875 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
FAM228BP0C875 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
FAM228BP0C875 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.95■□□□□ 0.94
FAM228BP0C875 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.95■□□□□ 0.94
FAM228BP0C875 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.95■□□□□ 0.94
FAM228BP0C875 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.95■□□□□ 0.94
FAM228BP0C875 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.95■□□□□ 0.94
FAM228BP0C875 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.95■□□□□ 0.94
FAM228BP0C875 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.95■□□□□ 0.94
FAM228BP0C875 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FAM228BP0C875 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.95■□□□□ 0.94
FAM228BP0C875 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.95■□□□□ 0.94
FAM228BP0C875 AC105036.2-201ENST00000569468 176 ntBASIC20.95■□□□□ 0.94
FAM228BP0C875 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FAM228BP0C875 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FAM228BP0C875 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
FAM228BP0C875 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.95■□□□□ 0.94
FAM228BP0C875 AC093503.3-201ENST00000624917 2352 ntBASIC20.95■□□□□ 0.94
FAM228BP0C875 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.95■□□□□ 0.94
FAM228BP0C875 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
FAM228BP0C875 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.95■□□□□ 0.94
FAM228BP0C875 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
FAM228BP0C875 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
FAM228BP0C875 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM228BP0C875 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM228BP0C875 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM228BP0C875 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
FAM228BP0C875 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
FAM228BP0C875 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM228BP0C875 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM228BP0C875 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.94■□□□□ 0.94
FAM228BP0C875 BX276092.2-201ENST00000417668 665 ntBASIC20.94■□□□□ 0.94
FAM228BP0C875 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.94■□□□□ 0.94
FAM228BP0C875 AF201337.1-201ENST00000520239 748 ntBASIC20.94■□□□□ 0.94
FAM228BP0C875 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
FAM228BP0C875 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FAM228BP0C875 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms