Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 RBM17P1-201ENST00000453646 1190 ntBASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 REXO1L10P-201ENST00000615707 1290 ntBASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 CR392000.1-201ENST00000624770 1228 ntBASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40ALP0C0E4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 TFP1-202ENST00000475455 1573 ntBASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 AC116562.2-201ENST00000507042 360 ntBASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB40ALP0C0E4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 YBX1P10-201ENST00000444752 975 ntBASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 C1QL1P1-201ENST00000568105 661 ntBASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB40ALP0C0E4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RAB40ALP0C0E4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RAB40ALP0C0E4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.53■□□□□ 0.56
RAB40ALP0C0E4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB40ALP0C0E4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB40ALP0C0E4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB40ALP0C0E4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.53■□□□□ 0.56
RAB40ALP0C0E4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.53■□□□□ 0.56
RAB40ALP0C0E4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
RAB40ALP0C0E4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAB40ALP0C0E4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB40ALP0C0E4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB40ALP0C0E4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RAB40ALP0C0E4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.53■□□□□ 0.56
RAB40ALP0C0E4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAB40ALP0C0E4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RAB40ALP0C0E4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.52■□□□□ 0.56
RAB40ALP0C0E4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAB40ALP0C0E4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RAB40ALP0C0E4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
RAB40ALP0C0E4 MIR1224-201ENST00000408193 85 ntBASIC18.52■□□□□ 0.56
RAB40ALP0C0E4 KRT18P21-201ENST00000515767 1272 ntBASIC18.52■□□□□ 0.56
RAB40ALP0C0E4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
RAB40ALP0C0E4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.52■□□□□ 0.56
RAB40ALP0C0E4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.52■□□□□ 0.56
RAB40ALP0C0E4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RAB40ALP0C0E4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms