Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.9■□□□□ 0.46
FREM3P0C091 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FREM3P0C091 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
FREM3P0C091 PHGDH-210ENST00000641115 1638 ntBASIC17.9■□□□□ 0.46
FREM3P0C091 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FREM3P0C091 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FREM3P0C091 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FREM3P0C091 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FREM3P0C091 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FREM3P0C091 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
FREM3P0C091 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FREM3P0C091 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FREM3P0C091 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
FREM3P0C091 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.9■□□□□ 0.46
FREM3P0C091 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FREM3P0C091 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.9■□□□□ 0.46
FREM3P0C091 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.9■□□□□ 0.46
FREM3P0C091 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.9■□□□□ 0.46
FREM3P0C091 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FREM3P0C091 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
FREM3P0C091 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
FREM3P0C091 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.89■□□□□ 0.46
FREM3P0C091 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FREM3P0C091 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FREM3P0C091 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.89■□□□□ 0.45
FREM3P0C091 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.89■□□□□ 0.45
FREM3P0C091 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.89■□□□□ 0.45
FREM3P0C091 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.89■□□□□ 0.45
FREM3P0C091 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.89■□□□□ 0.45
FREM3P0C091 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
FREM3P0C091 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FREM3P0C091 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
FREM3P0C091 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.89■□□□□ 0.45
FREM3P0C091 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
FREM3P0C091 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FREM3P0C091 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
FREM3P0C091 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FREM3P0C091 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FREM3P0C091 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.89■□□□□ 0.45
FREM3P0C091 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FREM3P0C091 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
FREM3P0C091 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.89■□□□□ 0.45
FREM3P0C091 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
FREM3P0C091 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
FREM3P0C091 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FREM3P0C091 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FREM3P0C091 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.89■□□□□ 0.45
FREM3P0C091 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.89■□□□□ 0.45
FREM3P0C091 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FREM3P0C091 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.89■□□□□ 0.45
FREM3P0C091 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.89■□□□□ 0.45
FREM3P0C091 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
FREM3P0C091 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
FREM3P0C091 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
FREM3P0C091 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
FREM3P0C091 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FREM3P0C091 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.88■□□□□ 0.45
FREM3P0C091 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FREM3P0C091 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.88■□□□□ 0.45
FREM3P0C091 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.88■□□□□ 0.45
FREM3P0C091 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FREM3P0C091 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.88■□□□□ 0.45
FREM3P0C091 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FREM3P0C091 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
FREM3P0C091 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FREM3P0C091 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FREM3P0C091 MIR718-201ENST00000390190 70 ntBASIC17.87■□□□□ 0.45
FREM3P0C091 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.87■□□□□ 0.45
FREM3P0C091 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.87■□□□□ 0.45
FREM3P0C091 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.87■□□□□ 0.45
FREM3P0C091 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FREM3P0C091 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.87■□□□□ 0.45
FREM3P0C091 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FREM3P0C091 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FREM3P0C091 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.87■□□□□ 0.45
FREM3P0C091 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.87■□□□□ 0.45
FREM3P0C091 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.87■□□□□ 0.45
FREM3P0C091 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.87■□□□□ 0.45
FREM3P0C091 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
FREM3P0C091 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
FREM3P0C091 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FREM3P0C091 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FREM3P0C091 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
FREM3P0C091 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FREM3P0C091 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FREM3P0C091 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
FREM3P0C091 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
FREM3P0C091 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
FREM3P0C091 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FREM3P0C091 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
FREM3P0C091 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.86■□□□□ 0.45
FREM3P0C091 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FREM3P0C091 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
FREM3P0C091 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FREM3P0C091 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FREM3P0C091 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
FREM3P0C091 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.86■□□□□ 0.45
FREM3P0C091 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
FREM3P0C091 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.86■□□□□ 0.45
FREM3P0C091 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms