Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTSDP07339 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.32■□□□□ 0.2
CTSDP07339 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTSDP07339 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTSDP07339 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTSDP07339 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTSDP07339 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTSDP07339 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.32■□□□□ 0.2
CTSDP07339 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTSDP07339 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
CTSDP07339 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CTSDP07339 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.32■□□□□ 0.2
CTSDP07339 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.32■□□□□ 0.2
CTSDP07339 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.32■□□□□ 0.2
CTSDP07339 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.32■□□□□ 0.2
CTSDP07339 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.32■□□□□ 0.2
CTSDP07339 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.32■□□□□ 0.2
CTSDP07339 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.32■□□□□ 0.2
CTSDP07339 AC079598.2-202ENST00000546624 1451 ntBASIC16.32■□□□□ 0.2
CTSDP07339 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CTSDP07339 LETM1P2-201ENST00000597330 2178 ntBASIC16.32■□□□□ 0.2
CTSDP07339 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CTSDP07339 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.32■□□□□ 0.2
CTSDP07339 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
CTSDP07339 AC138932.1-201ENST00000534164 6830 ntBASIC16.32■□□□□ 0.2
CTSDP07339 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CTSDP07339 AC026471.1-201ENST00000564629 3026 ntBASIC16.32■□□□□ 0.2
CTSDP07339 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CTSDP07339 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CTSDP07339 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
CTSDP07339 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 AC005082.1-201ENST00000413042 2259 ntBASIC16.31■□□□□ 0.2
CTSDP07339 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CTSDP07339 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
CTSDP07339 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CTSDP07339 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CTSDP07339 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.31■□□□□ 0.2
CTSDP07339 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.31■□□□□ 0.2
CTSDP07339 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CTSDP07339 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.31■□□□□ 0.2
CTSDP07339 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.31■□□□□ 0.2
CTSDP07339 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.31■□□□□ 0.2
CTSDP07339 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.31■□□□□ 0.2
CTSDP07339 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CTSDP07339 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CTSDP07339 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CTSDP07339 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CTSDP07339 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CTSDP07339 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CTSDP07339 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.31■□□□□ 0.2
CTSDP07339 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTSDP07339 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTSDP07339 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.3■□□□□ 0.2
CTSDP07339 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSDP07339 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSDP07339 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.3■□□□□ 0.2
CTSDP07339 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSDP07339 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSDP07339 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.3■□□□□ 0.2
CTSDP07339 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSDP07339 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSDP07339 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CTSDP07339 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CTSDP07339 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTSDP07339 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CTSDP07339 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSDP07339 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CTSDP07339 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
CTSDP07339 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CTSDP07339 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CTSDP07339 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSDP07339 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CTSDP07339 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTSDP07339 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.29■□□□□ 0.2
CTSDP07339 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTSDP07339 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms