Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.7■□□□□ 0.74
APOA4P06727 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
APOA4P06727 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
APOA4P06727 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOA4P06727 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
APOA4P06727 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOA4P06727 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOA4P06727 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
APOA4P06727 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
APOA4P06727 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOA4P06727 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
APOA4P06727 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
APOA4P06727 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
APOA4P06727 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
APOA4P06727 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOA4P06727 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOA4P06727 KRT16P6-202ENST00000425692 1426 ntBASIC19.69■□□□□ 0.74
APOA4P06727 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
APOA4P06727 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.69■□□□□ 0.74
APOA4P06727 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOA4P06727 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOA4P06727 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
APOA4P06727 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
APOA4P06727 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.69■□□□□ 0.74
APOA4P06727 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.69■□□□□ 0.74
APOA4P06727 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
APOA4P06727 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.69■□□□□ 0.74
APOA4P06727 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
APOA4P06727 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOA4P06727 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOA4P06727 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
APOA4P06727 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.69■□□□□ 0.74
APOA4P06727 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
APOA4P06727 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.68■□□□□ 0.74
APOA4P06727 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.68■□□□□ 0.74
APOA4P06727 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.68■□□□□ 0.74
APOA4P06727 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
APOA4P06727 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
APOA4P06727 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.68■□□□□ 0.74
APOA4P06727 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.68■□□□□ 0.74
APOA4P06727 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.68■□□□□ 0.74
APOA4P06727 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APOA4P06727 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.68■□□□□ 0.74
APOA4P06727 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
APOA4P06727 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APOA4P06727 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOA4P06727 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOA4P06727 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.67■□□□□ 0.74
APOA4P06727 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
APOA4P06727 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.67■□□□□ 0.74
APOA4P06727 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.67■□□□□ 0.74
APOA4P06727 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOA4P06727 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.67■□□□□ 0.74
APOA4P06727 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.67■□□□□ 0.74
APOA4P06727 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
APOA4P06727 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOA4P06727 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOA4P06727 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOA4P06727 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOA4P06727 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
APOA4P06727 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
APOA4P06727 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOA4P06727 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOA4P06727 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOA4P06727 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.67■□□□□ 0.74
APOA4P06727 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOA4P06727 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOA4P06727 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.66■□□□□ 0.74
APOA4P06727 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.66■□□□□ 0.74
APOA4P06727 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOA4P06727 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOA4P06727 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOA4P06727 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.66■□□□□ 0.74
APOA4P06727 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOA4P06727 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
APOA4P06727 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
APOA4P06727 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOA4P06727 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
APOA4P06727 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOA4P06727 AL390719.1-204ENST00000412397 1219 ntBASIC19.66■□□□□ 0.74
APOA4P06727 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.66■□□□□ 0.74
APOA4P06727 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.66■□□□□ 0.74
APOA4P06727 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.66■□□□□ 0.74
APOA4P06727 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.66■□□□□ 0.74
APOA4P06727 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.66■□□□□ 0.74
APOA4P06727 AC083880.1-201ENST00000608266 535 ntBASIC19.66■□□□□ 0.74
APOA4P06727 AC098818.2-201ENST00000564925 2320 ntBASIC19.66■□□□□ 0.74
APOA4P06727 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOA4P06727 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.66■□□□□ 0.74
APOA4P06727 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
APOA4P06727 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOA4P06727 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
APOA4P06727 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
APOA4P06727 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOA4P06727 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.65■□□□□ 0.74
APOA4P06727 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOA4P06727 Z82202.1-201ENST00000623446 1880 ntBASIC19.65■□□□□ 0.74
APOA4P06727 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOA4P06727 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOA4P06727 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms