Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RB1P06400 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.88■□□□□ 0.93
RB1P06400 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RB1P06400 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.88■□□□□ 0.93
RB1P06400 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RB1P06400 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.88■□□□□ 0.93
RB1P06400 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.88■□□□□ 0.93
RB1P06400 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.88■□□□□ 0.93
RB1P06400 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RB1P06400 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RB1P06400 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.88■□□□□ 0.93
RB1P06400 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.88■□□□□ 0.93
RB1P06400 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.88■□□□□ 0.93
RB1P06400 AL353719.1-201ENST00000566847 864 ntBASIC20.88■□□□□ 0.93
RB1P06400 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.88■□□□□ 0.93
RB1P06400 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.88■□□□□ 0.93
RB1P06400 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.88■□□□□ 0.93
RB1P06400 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.88■□□□□ 0.93
RB1P06400 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
RB1P06400 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RB1P06400 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RB1P06400 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
RB1P06400 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RB1P06400 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RB1P06400 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RB1P06400 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RB1P06400 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RB1P06400 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RB1P06400 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RB1P06400 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RB1P06400 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RB1P06400 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RB1P06400 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.87■□□□□ 0.93
RB1P06400 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.87■□□□□ 0.93
RB1P06400 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.87■□□□□ 0.93
RB1P06400 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.87■□□□□ 0.93
RB1P06400 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.87■□□□□ 0.93
RB1P06400 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.87■□□□□ 0.93
RB1P06400 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.87■□□□□ 0.93
RB1P06400 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.87■□□□□ 0.93
RB1P06400 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.87■□□□□ 0.93
RB1P06400 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RB1P06400 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RB1P06400 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
RB1P06400 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.87■□□□□ 0.93
RB1P06400 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RB1P06400 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.87■□□□□ 0.93
RB1P06400 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RB1P06400 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RB1P06400 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.87■□□□□ 0.93
RB1P06400 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RB1P06400 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RB1P06400 PLK5-205ENST00000642079 1969 ntBASIC20.86■□□□□ 0.93
RB1P06400 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RB1P06400 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RB1P06400 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
RB1P06400 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RB1P06400 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RB1P06400 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
RB1P06400 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RB1P06400 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.86■□□□□ 0.93
RB1P06400 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
RB1P06400 CA15P1-201ENST00000481698 905 ntBASIC20.86■□□□□ 0.93
RB1P06400 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RB1P06400 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RB1P06400 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.86■□□□□ 0.93
RB1P06400 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
RB1P06400 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RB1P06400 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RB1P06400 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RB1P06400 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.85■□□□□ 0.93
RB1P06400 IER3-202ENST00000376377 1350 ntBASIC20.85■□□□□ 0.93
RB1P06400 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RB1P06400 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RB1P06400 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RB1P06400 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RB1P06400 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RB1P06400 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RB1P06400 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.85■□□□□ 0.93
RB1P06400 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
RB1P06400 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.85■□□□□ 0.93
RB1P06400 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RB1P06400 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RB1P06400 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
RB1P06400 TPM4P1-201ENST00000436100 807 ntBASIC20.85■□□□□ 0.93
RB1P06400 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.85■□□□□ 0.93
RB1P06400 AC140113.3-201ENST00000605663 199 ntBASIC20.85■□□□□ 0.93
RB1P06400 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.85■□□□□ 0.93
RB1P06400 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RB1P06400 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RB1P06400 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.85■□□□□ 0.93
RB1P06400 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RB1P06400 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RB1P06400 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RB1P06400 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RB1P06400 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RB1P06400 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RB1P06400 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RB1P06400 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RB1P06400 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms