Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 KRT18P68-201ENST00000392293 1000 ntBASIC17.8■□□□□ 0.44
HMGN1P05114 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.8■□□□□ 0.44
HMGN1P05114 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.8■□□□□ 0.44
HMGN1P05114 AC105020.6-201ENST00000621523 1217 ntBASIC17.8■□□□□ 0.44
HMGN1P05114 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGN1P05114 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGN1P05114 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGN1P05114 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HMGN1P05114 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
HMGN1P05114 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HMGN1P05114 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.8■□□□□ 0.44
HMGN1P05114 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
HMGN1P05114 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGN1P05114 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGN1P05114 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HMGN1P05114 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGN1P05114 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGN1P05114 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMGN1P05114 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
HMGN1P05114 PHGDH-210ENST00000641115 1638 ntBASIC17.8■□□□□ 0.44
HMGN1P05114 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.79■□□□□ 0.44
HMGN1P05114 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGN1P05114 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGN1P05114 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
HMGN1P05114 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGN1P05114 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
HMGN1P05114 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.79■□□□□ 0.44
HMGN1P05114 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HMGN1P05114 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGN1P05114 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMGN1P05114 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMGN1P05114 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGN1P05114 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGN1P05114 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGN1P05114 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.79■□□□□ 0.44
HMGN1P05114 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGN1P05114 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.79■□□□□ 0.44
HMGN1P05114 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGN1P05114 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.79■□□□□ 0.44
HMGN1P05114 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.79■□□□□ 0.44
HMGN1P05114 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.79■□□□□ 0.44
HMGN1P05114 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
HMGN1P05114 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGN1P05114 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMGN1P05114 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
HMGN1P05114 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGN1P05114 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGN1P05114 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGN1P05114 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.79■□□□□ 0.44
HMGN1P05114 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.79■□□□□ 0.44
HMGN1P05114 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HMGN1P05114 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMGN1P05114 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.79■□□□□ 0.44
HMGN1P05114 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMGN1P05114 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
HMGN1P05114 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.79■□□□□ 0.44
HMGN1P05114 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGN1P05114 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.78■□□□□ 0.44
HMGN1P05114 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMGN1P05114 AC026471.1-201ENST00000564629 3026 ntBASIC17.78■□□□□ 0.44
HMGN1P05114 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
HMGN1P05114 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMGN1P05114 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGN1P05114 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
HMGN1P05114 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGN1P05114 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.78■□□□□ 0.44
HMGN1P05114 LETM1P2-201ENST00000597330 2178 ntBASIC17.78■□□□□ 0.44
HMGN1P05114 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGN1P05114 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.78■□□□□ 0.44
HMGN1P05114 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMGN1P05114 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGN1P05114 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HMGN1P05114 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMGN1P05114 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.78■□□□□ 0.44
HMGN1P05114 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGN1P05114 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGN1P05114 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.77■□□□□ 0.44
HMGN1P05114 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGN1P05114 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGN1P05114 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGN1P05114 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.77■□□□□ 0.44
HMGN1P05114 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
HMGN1P05114 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
HMGN1P05114 NTF6G-201ENST00000591094 616 ntBASIC17.77■□□□□ 0.44
HMGN1P05114 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.77■□□□□ 0.44
HMGN1P05114 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGN1P05114 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGN1P05114 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGN1P05114 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMGN1P05114 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HMGN1P05114 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMGN1P05114 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
HMGN1P05114 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
HMGN1P05114 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
HMGN1P05114 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMGN1P05114 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.76■□□□□ 0.43
HMGN1P05114 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMGN1P05114 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
HMGN1P05114 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.76■□□□□ 0.43
HMGN1P05114 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms