Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
PCF11O94913 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC30.81■■■□□ 2.52
PCF11O94913 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
PCF11O94913 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC30.81■■■□□ 2.52
PCF11O94913 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC30.81■■■□□ 2.52
PCF11O94913 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
PCF11O94913 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC30.81■■■□□ 2.52
PCF11O94913 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
PCF11O94913 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC30.8■■■□□ 2.52
PCF11O94913 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PCF11O94913 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
PCF11O94913 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
PCF11O94913 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC30.8■■■□□ 2.52
PCF11O94913 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
PCF11O94913 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC30.8■■■□□ 2.52
PCF11O94913 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
PCF11O94913 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
PCF11O94913 KRT8P8-201ENST00000434750 1448 ntBASIC30.8■■■□□ 2.52
PCF11O94913 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
PCF11O94913 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PCF11O94913 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
PCF11O94913 TMA16-209ENST00000513272 803 ntTSL 2 BASIC30.79■■■□□ 2.52
PCF11O94913 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC30.79■■■□□ 2.52
PCF11O94913 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC30.79■■■□□ 2.52
PCF11O94913 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PCF11O94913 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC30.79■■■□□ 2.52
PCF11O94913 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC30.79■■■□□ 2.52
PCF11O94913 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC30.79■■■□□ 2.52
PCF11O94913 AC006011.2-201ENST00000621313 1158 ntBASIC30.79■■■□□ 2.52
PCF11O94913 AL512408.1-201ENST00000569378 2000 ntBASIC30.79■■■□□ 2.52
PCF11O94913 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC30.79■■■□□ 2.52
PCF11O94913 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
PCF11O94913 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PCF11O94913 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
PCF11O94913 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
PCF11O94913 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC30.78■■■□□ 2.52
PCF11O94913 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC30.78■■■□□ 2.52
PCF11O94913 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PCF11O94913 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
PCF11O94913 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
PCF11O94913 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC30.78■■■□□ 2.52
PCF11O94913 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
PCF11O94913 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC30.78■■■□□ 2.52
PCF11O94913 AC011298.2-201ENST00000617989 482 ntBASIC30.78■■■□□ 2.52
PCF11O94913 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC30.78■■■□□ 2.52
PCF11O94913 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PCF11O94913 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PCF11O94913 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PCF11O94913 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC30.77■■■□□ 2.52
PCF11O94913 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PCF11O94913 INGX-201ENST00000359239 846 ntBASIC30.77■■■□□ 2.52
PCF11O94913 NTF6B-201ENST00000591913 560 ntBASIC30.77■■■□□ 2.52
PCF11O94913 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC30.77■■■□□ 2.52
PCF11O94913 AC005363.2-201ENST00000618631 242 ntBASIC30.77■■■□□ 2.52
PCF11O94913 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC30.77■■■□□ 2.52
PCF11O94913 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PCF11O94913 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PCF11O94913 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC30.77■■■□□ 2.52
PCF11O94913 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PCF11O94913 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
PCF11O94913 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC30.76■■■□□ 2.52
PCF11O94913 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
PCF11O94913 FAM87A-204ENST00000613235 858 ntBASIC30.76■■■□□ 2.52
PCF11O94913 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC30.76■■■□□ 2.51
PCF11O94913 CD37-204ENST00000535669 1674 ntTSL 2 BASIC30.76■■■□□ 2.51
PCF11O94913 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
PCF11O94913 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
PCF11O94913 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC30.76■■■□□ 2.51
PCF11O94913 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC30.76■■■□□ 2.51
PCF11O94913 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
PCF11O94913 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
PCF11O94913 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
PCF11O94913 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PCF11O94913 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC30.75■■■□□ 2.51
PCF11O94913 TOLLIP-AS1-201ENST00000530897 939 ntBASIC30.75■■■□□ 2.51
PCF11O94913 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
PCF11O94913 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
PCF11O94913 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
PCF11O94913 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
PCF11O94913 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
PCF11O94913 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC30.75■■■□□ 2.51
PCF11O94913 KRT18P22-201ENST00000402024 1347 ntBASIC30.75■■■□□ 2.51
PCF11O94913 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
PCF11O94913 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
PCF11O94913 TSPY14P-201ENST00000303979 915 ntBASIC30.75■■■□□ 2.51
PCF11O94913 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
PCF11O94913 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC30.75■■■□□ 2.51
PCF11O94913 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC30.75■■■□□ 2.51
PCF11O94913 AC131212.4-201ENST00000623606 975 ntBASIC30.75■■■□□ 2.51
PCF11O94913 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC30.75■■■□□ 2.51
PCF11O94913 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
PCF11O94913 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
PCF11O94913 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PCF11O94913 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC30.74■■■□□ 2.51
PCF11O94913 AC008040.2-201ENST00000461049 708 ntBASIC30.74■■■□□ 2.51
PCF11O94913 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC30.74■■■□□ 2.51
PCF11O94913 METTL23-204ENST00000586752 904 ntTSL 2 BASIC30.74■■■□□ 2.51
PCF11O94913 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
PCF11O94913 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
PCF11O94913 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms