Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLPXO76031 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.82■□□□□ 0.44
CLPXO76031 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLPXO76031 AC090340.1-201ENST00000620778 4980 ntBASIC17.82■□□□□ 0.44
CLPXO76031 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLPXO76031 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.82■□□□□ 0.44
CLPXO76031 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLPXO76031 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CLPXO76031 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPXO76031 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.81■□□□□ 0.44
CLPXO76031 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPXO76031 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.81■□□□□ 0.44
CLPXO76031 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CLPXO76031 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPXO76031 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLPXO76031 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPXO76031 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CLPXO76031 AL162430.1-201ENST00000480705 870 ntBASIC17.81■□□□□ 0.44
CLPXO76031 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.81■□□□□ 0.44
CLPXO76031 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.81■□□□□ 0.44
CLPXO76031 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.81■□□□□ 0.44
CLPXO76031 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CLPXO76031 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.81■□□□□ 0.44
CLPXO76031 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPXO76031 AC090164.3-201ENST00000610780 2143 ntBASIC17.81■□□□□ 0.44
CLPXO76031 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CLPXO76031 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLPXO76031 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPXO76031 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
CLPXO76031 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLPXO76031 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLPXO76031 HCG11-201ENST00000411553 5696 ntBASIC17.81■□□□□ 0.44
CLPXO76031 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLPXO76031 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.8■□□□□ 0.44
CLPXO76031 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CLPXO76031 TSPY26P-201ENST00000476365 1326 ntBASIC17.8■□□□□ 0.44
CLPXO76031 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CLPXO76031 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLPXO76031 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLPXO76031 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLPXO76031 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLPXO76031 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.8■□□□□ 0.44
CLPXO76031 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.8■□□□□ 0.44
CLPXO76031 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.8■□□□□ 0.44
CLPXO76031 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.8■□□□□ 0.44
CLPXO76031 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.8■□□□□ 0.44
CLPXO76031 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.8■□□□□ 0.44
CLPXO76031 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CLPXO76031 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLPXO76031 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLPXO76031 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLPXO76031 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLPXO76031 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLPXO76031 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
CLPXO76031 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPXO76031 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.79■□□□□ 0.44
CLPXO76031 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CLPXO76031 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLPXO76031 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPXO76031 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CLPXO76031 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.79■□□□□ 0.44
CLPXO76031 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLPXO76031 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPXO76031 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPXO76031 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.79■□□□□ 0.44
CLPXO76031 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPXO76031 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPXO76031 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLPXO76031 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPXO76031 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPXO76031 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLPXO76031 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPXO76031 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPXO76031 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.79■□□□□ 0.44
CLPXO76031 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.79■□□□□ 0.44
CLPXO76031 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CLPXO76031 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
CLPXO76031 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPXO76031 AL354751.1-201ENST00000412768 1863 ntBASIC17.79■□□□□ 0.44
CLPXO76031 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.79■□□□□ 0.44
CLPXO76031 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPXO76031 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPXO76031 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPXO76031 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPXO76031 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CLPXO76031 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.79■□□□□ 0.44
CLPXO76031 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLPXO76031 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLPXO76031 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLPXO76031 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLPXO76031 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CLPXO76031 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLPXO76031 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.78■□□□□ 0.44
CLPXO76031 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLPXO76031 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLPXO76031 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.78■□□□□ 0.44
CLPXO76031 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.78■□□□□ 0.44
CLPXO76031 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CLPXO76031 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CLPXO76031 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms