Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
TRIM3O75382 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM3O75382 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM3O75382 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM3O75382 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM3O75382 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM3O75382 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM3O75382 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM3O75382 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.31■□□□□ 0.52
TRIM3O75382 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.31■□□□□ 0.52
TRIM3O75382 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.31■□□□□ 0.52
TRIM3O75382 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TRIM3O75382 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.31■□□□□ 0.52
TRIM3O75382 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM3O75382 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.31■□□□□ 0.52
TRIM3O75382 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM3O75382 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM3O75382 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM3O75382 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM3O75382 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM3O75382 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM3O75382 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM3O75382 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM3O75382 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM3O75382 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM3O75382 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TRIM3O75382 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.3■□□□□ 0.52
TRIM3O75382 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM3O75382 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM3O75382 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
TRIM3O75382 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TRIM3O75382 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM3O75382 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM3O75382 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM3O75382 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.3■□□□□ 0.52
TRIM3O75382 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM3O75382 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TRIM3O75382 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.3■□□□□ 0.52
TRIM3O75382 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM3O75382 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRIM3O75382 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM3O75382 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRIM3O75382 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.3■□□□□ 0.52
TRIM3O75382 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM3O75382 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM3O75382 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM3O75382 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRIM3O75382 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM3O75382 AFG3L1P-217ENST00000557444 2447 ntBASIC18.29■□□□□ 0.52
TRIM3O75382 AC092720.2-201ENST00000602388 1665 ntBASIC18.29■□□□□ 0.52
TRIM3O75382 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM3O75382 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM3O75382 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRIM3O75382 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM3O75382 AC098590.1-201ENST00000468126 897 ntBASIC18.29■□□□□ 0.52
TRIM3O75382 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM3O75382 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM3O75382 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.29■□□□□ 0.52
TRIM3O75382 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM3O75382 AC069544.1-201ENST00000609399 999 ntBASIC18.29■□□□□ 0.52
TRIM3O75382 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM3O75382 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM3O75382 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM3O75382 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM3O75382 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM3O75382 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM3O75382 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM3O75382 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM3O75382 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM3O75382 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.29■□□□□ 0.52
TRIM3O75382 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRIM3O75382 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TRIM3O75382 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.29■□□□□ 0.52
TRIM3O75382 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM3O75382 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM3O75382 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM3O75382 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM3O75382 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM3O75382 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM3O75382 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM3O75382 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM3O75382 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM3O75382 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM3O75382 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM3O75382 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.28■□□□□ 0.52
TRIM3O75382 AC233263.1-201ENST00000578059 224 ntBASIC18.28■□□□□ 0.52
TRIM3O75382 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM3O75382 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM3O75382 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TRIM3O75382 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM3O75382 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM3O75382 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM3O75382 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM3O75382 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM3O75382 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM3O75382 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM3O75382 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM3O75382 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.27■□□□□ 0.52
TRIM3O75382 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.27■□□□□ 0.52
TRIM3O75382 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms