Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
URB1O60287 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
URB1O60287 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
URB1O60287 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
URB1O60287 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
URB1O60287 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
URB1O60287 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
URB1O60287 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
URB1O60287 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
URB1O60287 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.59■□□□□ 0.57
URB1O60287 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
URB1O60287 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
URB1O60287 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.59■□□□□ 0.57
URB1O60287 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
URB1O60287 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
URB1O60287 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
URB1O60287 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.59■□□□□ 0.57
URB1O60287 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
URB1O60287 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
URB1O60287 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
URB1O60287 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.58■□□□□ 0.57
URB1O60287 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.58■□□□□ 0.57
URB1O60287 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.58■□□□□ 0.57
URB1O60287 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.58■□□□□ 0.57
URB1O60287 IER3-202ENST00000376377 1350 ntBASIC18.58■□□□□ 0.57
URB1O60287 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.58■□□□□ 0.57
URB1O60287 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
URB1O60287 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
URB1O60287 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
URB1O60287 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
URB1O60287 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.58■□□□□ 0.56
URB1O60287 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.58■□□□□ 0.56
URB1O60287 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.58■□□□□ 0.56
URB1O60287 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.58■□□□□ 0.56
URB1O60287 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
URB1O60287 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.58■□□□□ 0.56
URB1O60287 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
URB1O60287 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.58■□□□□ 0.56
URB1O60287 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
URB1O60287 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
URB1O60287 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
URB1O60287 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
URB1O60287 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
URB1O60287 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
URB1O60287 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
URB1O60287 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
URB1O60287 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
URB1O60287 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
URB1O60287 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.57■□□□□ 0.56
URB1O60287 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.57■□□□□ 0.56
URB1O60287 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.57■□□□□ 0.56
URB1O60287 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
URB1O60287 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
URB1O60287 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
URB1O60287 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
URB1O60287 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
URB1O60287 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
URB1O60287 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.57■□□□□ 0.56
URB1O60287 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.57■□□□□ 0.56
URB1O60287 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
URB1O60287 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
URB1O60287 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
URB1O60287 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
URB1O60287 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.57■□□□□ 0.56
URB1O60287 C1QL1P1-201ENST00000568105 661 ntBASIC18.57■□□□□ 0.56
URB1O60287 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.57■□□□□ 0.56
URB1O60287 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
URB1O60287 AC004263.2-201ENST00000617183 678 ntBASIC18.57■□□□□ 0.56
URB1O60287 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.57■□□□□ 0.56
URB1O60287 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
URB1O60287 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.57■□□□□ 0.56
URB1O60287 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
URB1O60287 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
URB1O60287 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
URB1O60287 PTBP1P-201ENST00000554374 1601 ntBASIC18.57■□□□□ 0.56
URB1O60287 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
URB1O60287 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.56■□□□□ 0.56
URB1O60287 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.56■□□□□ 0.56
URB1O60287 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
URB1O60287 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.56■□□□□ 0.56
URB1O60287 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
URB1O60287 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.56■□□□□ 0.56
URB1O60287 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
URB1O60287 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
URB1O60287 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.56■□□□□ 0.56
URB1O60287 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.56■□□□□ 0.56
URB1O60287 AC246785.2-201ENST00000432512 513 ntBASIC18.56■□□□□ 0.56
URB1O60287 FDX1P1-201ENST00000449115 551 ntBASIC18.56■□□□□ 0.56
URB1O60287 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
URB1O60287 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.56■□□□□ 0.56
URB1O60287 AC116562.4-202ENST00000641738 218 ntBASIC18.56■□□□□ 0.56
URB1O60287 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
URB1O60287 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
URB1O60287 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
URB1O60287 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
URB1O60287 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
URB1O60287 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
URB1O60287 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.56■□□□□ 0.56
URB1O60287 AP000692.2-201ENST00000608391 879 ntBASIC18.56■□□□□ 0.56
URB1O60287 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms