Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PRICKLE3O43900 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.94■□□□□ 0.62
PRICKLE3O43900 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PRICKLE3O43900 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PRICKLE3O43900 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRICKLE3O43900 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.93■□□□□ 0.62
PRICKLE3O43900 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRICKLE3O43900 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRICKLE3O43900 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRICKLE3O43900 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRICKLE3O43900 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRICKLE3O43900 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.93■□□□□ 0.62
PRICKLE3O43900 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRICKLE3O43900 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.93■□□□□ 0.62
PRICKLE3O43900 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.93■□□□□ 0.62
PRICKLE3O43900 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.93■□□□□ 0.62
PRICKLE3O43900 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.93■□□□□ 0.62
PRICKLE3O43900 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.93■□□□□ 0.62
PRICKLE3O43900 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.93■□□□□ 0.62
PRICKLE3O43900 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.93■□□□□ 0.62
PRICKLE3O43900 FAM197Y4-202ENST00000622692 608 ntBASIC18.93■□□□□ 0.62
PRICKLE3O43900 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.93■□□□□ 0.62
PRICKLE3O43900 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRICKLE3O43900 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRICKLE3O43900 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRICKLE3O43900 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRICKLE3O43900 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRICKLE3O43900 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
PRICKLE3O43900 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PRICKLE3O43900 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRICKLE3O43900 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.93■□□□□ 0.62
PRICKLE3O43900 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRICKLE3O43900 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PRICKLE3O43900 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRICKLE3O43900 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRICKLE3O43900 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.92■□□□□ 0.62
PRICKLE3O43900 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.92■□□□□ 0.62
PRICKLE3O43900 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRICKLE3O43900 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRICKLE3O43900 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRICKLE3O43900 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRICKLE3O43900 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.92■□□□□ 0.62
PRICKLE3O43900 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.92■□□□□ 0.62
PRICKLE3O43900 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.92■□□□□ 0.62
PRICKLE3O43900 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.92■□□□□ 0.62
PRICKLE3O43900 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.92■□□□□ 0.62
PRICKLE3O43900 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
PRICKLE3O43900 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRICKLE3O43900 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
PRICKLE3O43900 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRICKLE3O43900 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRICKLE3O43900 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRICKLE3O43900 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
PRICKLE3O43900 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRICKLE3O43900 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
PRICKLE3O43900 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRICKLE3O43900 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PRICKLE3O43900 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRICKLE3O43900 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRICKLE3O43900 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRICKLE3O43900 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PRICKLE3O43900 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.91■□□□□ 0.62
PRICKLE3O43900 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRICKLE3O43900 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRICKLE3O43900 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.91■□□□□ 0.62
PRICKLE3O43900 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRICKLE3O43900 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PRICKLE3O43900 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRICKLE3O43900 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRICKLE3O43900 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRICKLE3O43900 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRICKLE3O43900 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRICKLE3O43900 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PRICKLE3O43900 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.9■□□□□ 0.62
PRICKLE3O43900 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRICKLE3O43900 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.9■□□□□ 0.62
PRICKLE3O43900 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.9■□□□□ 0.62
PRICKLE3O43900 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRICKLE3O43900 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.9■□□□□ 0.62
PRICKLE3O43900 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRICKLE3O43900 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.9■□□□□ 0.62
PRICKLE3O43900 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.9■□□□□ 0.62
PRICKLE3O43900 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.9■□□□□ 0.62
PRICKLE3O43900 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
PRICKLE3O43900 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.9■□□□□ 0.62
PRICKLE3O43900 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRICKLE3O43900 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PRICKLE3O43900 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.9■□□□□ 0.62
PRICKLE3O43900 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.9■□□□□ 0.62
PRICKLE3O43900 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PRICKLE3O43900 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PRICKLE3O43900 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.9■□□□□ 0.62
PRICKLE3O43900 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
PRICKLE3O43900 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRICKLE3O43900 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRICKLE3O43900 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRICKLE3O43900 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRICKLE3O43900 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PRICKLE3O43900 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRICKLE3O43900 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms