Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SSNA1O43805 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSNA1O43805 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.76■□□□□ 0.27
SSNA1O43805 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.76■□□□□ 0.27
SSNA1O43805 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SSNA1O43805 MIR2861-201ENST00000636310 90 ntBASIC16.76■□□□□ 0.27
SSNA1O43805 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.76■□□□□ 0.27
SSNA1O43805 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSNA1O43805 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SSNA1O43805 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SSNA1O43805 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SSNA1O43805 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SSNA1O43805 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SSNA1O43805 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SSNA1O43805 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSNA1O43805 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.75■□□□□ 0.27
SSNA1O43805 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSNA1O43805 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.75■□□□□ 0.27
SSNA1O43805 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
SSNA1O43805 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSNA1O43805 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSNA1O43805 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSNA1O43805 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SSNA1O43805 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.75■□□□□ 0.27
SSNA1O43805 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSNA1O43805 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SSNA1O43805 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SSNA1O43805 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSNA1O43805 RARRES2P2-201ENST00000394842 485 ntBASIC16.75■□□□□ 0.27
SSNA1O43805 AC103724.3-201ENST00000564481 992 ntBASIC16.75■□□□□ 0.27
SSNA1O43805 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSNA1O43805 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SSNA1O43805 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSNA1O43805 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.75■□□□□ 0.27
SSNA1O43805 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.75■□□□□ 0.27
SSNA1O43805 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSNA1O43805 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSNA1O43805 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SSNA1O43805 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSNA1O43805 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSNA1O43805 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.75■□□□□ 0.27
SSNA1O43805 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSNA1O43805 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.75■□□□□ 0.27
SSNA1O43805 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSNA1O43805 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SSNA1O43805 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SSNA1O43805 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.74■□□□□ 0.27
SSNA1O43805 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SSNA1O43805 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSNA1O43805 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSNA1O43805 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSNA1O43805 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSNA1O43805 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SSNA1O43805 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSNA1O43805 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SSNA1O43805 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSNA1O43805 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSNA1O43805 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SSNA1O43805 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSNA1O43805 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SSNA1O43805 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSNA1O43805 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSNA1O43805 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SSNA1O43805 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.74■□□□□ 0.27
SSNA1O43805 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.74■□□□□ 0.27
SSNA1O43805 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.74■□□□□ 0.27
SSNA1O43805 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.74■□□□□ 0.27
SSNA1O43805 AC092028.1-203ENST00000608262 953 ntBASIC16.74■□□□□ 0.27
SSNA1O43805 AC090164.3-201ENST00000610780 2143 ntBASIC16.74■□□□□ 0.27
SSNA1O43805 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSNA1O43805 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.74■□□□□ 0.27
SSNA1O43805 NOC2LP1-202ENST00000452600 2235 ntBASIC16.74■□□□□ 0.27
SSNA1O43805 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSNA1O43805 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.74■□□□□ 0.27
SSNA1O43805 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SSNA1O43805 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SSNA1O43805 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SSNA1O43805 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSNA1O43805 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SSNA1O43805 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSNA1O43805 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.74■□□□□ 0.27
SSNA1O43805 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SSNA1O43805 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SSNA1O43805 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SSNA1O43805 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SSNA1O43805 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSNA1O43805 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.73■□□□□ 0.27
SSNA1O43805 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSNA1O43805 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSNA1O43805 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSNA1O43805 NOC2LP2-201ENST00000407594 1944 ntBASIC16.73■□□□□ 0.27
SSNA1O43805 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSNA1O43805 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSNA1O43805 MIR3181-201ENST00000578512 73 ntBASIC16.73■□□□□ 0.27
SSNA1O43805 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SSNA1O43805 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
SSNA1O43805 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSNA1O43805 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSNA1O43805 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SSNA1O43805 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms