Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
XRCC2O43543 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.09■□□□□ 0.33
XRCC2O43543 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.09■□□□□ 0.33
XRCC2O43543 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.09■□□□□ 0.33
XRCC2O43543 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.09■□□□□ 0.33
XRCC2O43543 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
XRCC2O43543 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
XRCC2O43543 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
XRCC2O43543 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
XRCC2O43543 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
XRCC2O43543 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
XRCC2O43543 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
XRCC2O43543 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
XRCC2O43543 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
XRCC2O43543 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.08■□□□□ 0.33
XRCC2O43543 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.08■□□□□ 0.33
XRCC2O43543 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
XRCC2O43543 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
XRCC2O43543 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
XRCC2O43543 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.08■□□□□ 0.32
XRCC2O43543 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
XRCC2O43543 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
XRCC2O43543 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
XRCC2O43543 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.08■□□□□ 0.32
XRCC2O43543 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.08■□□□□ 0.32
XRCC2O43543 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.08■□□□□ 0.32
XRCC2O43543 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.08■□□□□ 0.32
XRCC2O43543 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.08■□□□□ 0.32
XRCC2O43543 HLA-B-256ENST00000639848 1089 ntBASIC17.08■□□□□ 0.32
XRCC2O43543 MYC-209ENST00000641252 345 ntBASIC17.08■□□□□ 0.32
XRCC2O43543 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
XRCC2O43543 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC2O43543 AC116351.2-201ENST00000606540 1585 ntBASIC17.07■□□□□ 0.32
XRCC2O43543 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC2O43543 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
XRCC2O43543 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.07■□□□□ 0.32
XRCC2O43543 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC2O43543 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC2O43543 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.07■□□□□ 0.32
XRCC2O43543 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC2O43543 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC2O43543 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.07■□□□□ 0.32
XRCC2O43543 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.07■□□□□ 0.32
XRCC2O43543 AC133041.1-202ENST00000642053 222 ntBASIC17.07■□□□□ 0.32
XRCC2O43543 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.07■□□□□ 0.32
XRCC2O43543 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC2O43543 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC2O43543 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC2O43543 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC2O43543 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC2O43543 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
XRCC2O43543 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
XRCC2O43543 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
XRCC2O43543 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
XRCC2O43543 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
XRCC2O43543 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.06■□□□□ 0.32
XRCC2O43543 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
XRCC2O43543 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC2O43543 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
XRCC2O43543 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC2O43543 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC2O43543 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC2O43543 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.06■□□□□ 0.32
XRCC2O43543 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC2O43543 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC2O43543 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC2O43543 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.06■□□□□ 0.32
XRCC2O43543 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
XRCC2O43543 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC2O43543 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.06■□□□□ 0.32
XRCC2O43543 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.06■□□□□ 0.32
XRCC2O43543 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.06■□□□□ 0.32
XRCC2O43543 AC060766.5-201ENST00000590539 871 ntBASIC17.06■□□□□ 0.32
XRCC2O43543 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.06■□□□□ 0.32
XRCC2O43543 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC2O43543 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC2O43543 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC2O43543 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC2O43543 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.06■□□□□ 0.32
XRCC2O43543 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
XRCC2O43543 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.06■□□□□ 0.32
XRCC2O43543 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.06■□□□□ 0.32
XRCC2O43543 AC092368.3-202ENST00000574180 1591 ntBASIC17.06■□□□□ 0.32
XRCC2O43543 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.06■□□□□ 0.32
XRCC2O43543 AC018553.1-201ENST00000616682 1458 ntBASIC17.05■□□□□ 0.32
XRCC2O43543 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
XRCC2O43543 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
XRCC2O43543 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
XRCC2O43543 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.05■□□□□ 0.32
XRCC2O43543 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.05■□□□□ 0.32
XRCC2O43543 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.05■□□□□ 0.32
XRCC2O43543 TREX1-205ENST00000625293 1783 ntBASIC17.05■□□□□ 0.32
XRCC2O43543 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.05■□□□□ 0.32
XRCC2O43543 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
XRCC2O43543 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
XRCC2O43543 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
XRCC2O43543 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
XRCC2O43543 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
XRCC2O43543 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.05■□□□□ 0.32
XRCC2O43543 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms