Protein–RNA interactions for Protein: O15554

KCNN4, Intermediate conductance calcium-activated potassium channel protein 4, humanhuman

Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4O15554 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.22■□□□□ 0.83
KCNN4O15554 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNN4O15554 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.22■□□□□ 0.83
KCNN4O15554 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNN4O15554 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNN4O15554 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.21■□□□□ 0.83
KCNN4O15554 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNN4O15554 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNN4O15554 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNN4O15554 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.21■□□□□ 0.83
KCNN4O15554 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNN4O15554 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.21■□□□□ 0.83
KCNN4O15554 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.21■□□□□ 0.83
KCNN4O15554 TSPY6P-201ENST00000448518 926 ntBASIC20.21■□□□□ 0.83
KCNN4O15554 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.21■□□□□ 0.83
KCNN4O15554 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNN4O15554 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
KCNN4O15554 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
KCNN4O15554 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNN4O15554 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.21■□□□□ 0.83
KCNN4O15554 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.21■□□□□ 0.83
KCNN4O15554 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNN4O15554 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNN4O15554 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.21■□□□□ 0.83
KCNN4O15554 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNN4O15554 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
KCNN4O15554 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
KCNN4O15554 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.2■□□□□ 0.82
KCNN4O15554 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.2■□□□□ 0.82
KCNN4O15554 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNN4O15554 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNN4O15554 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
KCNN4O15554 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNN4O15554 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNN4O15554 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNN4O15554 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KCNN4O15554 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
KCNN4O15554 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
KCNN4O15554 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNN4O15554 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KCNN4O15554 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KCNN4O15554 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KCNN4O15554 AC091874.3-201ENST00000512672 1195 ntBASIC20.2■□□□□ 0.82
KCNN4O15554 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KCNN4O15554 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.2■□□□□ 0.82
KCNN4O15554 AC005829.2-201ENST00000571422 1056 ntBASIC20.2■□□□□ 0.82
KCNN4O15554 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.2■□□□□ 0.82
KCNN4O15554 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
KCNN4O15554 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNN4O15554 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.2■□□□□ 0.82
KCNN4O15554 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.2■□□□□ 0.82
KCNN4O15554 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
KCNN4O15554 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KCNN4O15554 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
KCNN4O15554 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KCNN4O15554 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
KCNN4O15554 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNN4O15554 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.19■□□□□ 0.82
KCNN4O15554 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.19■□□□□ 0.82
KCNN4O15554 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
KCNN4O15554 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
KCNN4O15554 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNN4O15554 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.19■□□□□ 0.82
KCNN4O15554 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.19■□□□□ 0.82
KCNN4O15554 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.19■□□□□ 0.82
KCNN4O15554 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.19■□□□□ 0.82
KCNN4O15554 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KCNN4O15554 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.19■□□□□ 0.82
KCNN4O15554 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNN4O15554 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.19■□□□□ 0.82
KCNN4O15554 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.19■□□□□ 0.82
KCNN4O15554 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.19■□□□□ 0.82
KCNN4O15554 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
KCNN4O15554 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.19■□□□□ 0.82
KCNN4O15554 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.19■□□□□ 0.82
KCNN4O15554 AC116351.2-201ENST00000606540 1585 ntBASIC20.19■□□□□ 0.82
KCNN4O15554 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KCNN4O15554 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.19■□□□□ 0.82
KCNN4O15554 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
KCNN4O15554 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
KCNN4O15554 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNN4O15554 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KCNN4O15554 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.18■□□□□ 0.82
KCNN4O15554 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.18■□□□□ 0.82
KCNN4O15554 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
KCNN4O15554 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNN4O15554 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNN4O15554 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNN4O15554 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.18■□□□□ 0.82
KCNN4O15554 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.18■□□□□ 0.82
KCNN4O15554 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.18■□□□□ 0.82
KCNN4O15554 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.18■□□□□ 0.82
KCNN4O15554 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNN4O15554 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
KCNN4O15554 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNN4O15554 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.18■□□□□ 0.82
KCNN4O15554 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KCNN4O15554 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
KCNN4O15554 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KCNN4O15554 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms