Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
ATP2A1O14983 LINC01568-207ENST00000641790 1380 ntBASIC22.58■■□□□ 1.21
ATP2A1O14983 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC22.58■■□□□ 1.2
ATP2A1O14983 BX119927.1-201ENST00000636596 1552 ntBASIC22.58■■□□□ 1.2
ATP2A1O14983 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
ATP2A1O14983 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
ATP2A1O14983 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ATP2A1O14983 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ATP2A1O14983 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ATP2A1O14983 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
ATP2A1O14983 TMPOP1-202ENST00000424642 1267 ntBASIC22.57■■□□□ 1.2
ATP2A1O14983 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC22.57■■□□□ 1.2
ATP2A1O14983 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC22.57■■□□□ 1.2
ATP2A1O14983 RN7SL850P-201ENST00000579959 291 ntBASIC22.57■■□□□ 1.2
ATP2A1O14983 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ATP2A1O14983 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC22.57■■□□□ 1.2
ATP2A1O14983 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ATP2A1O14983 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.57■■□□□ 1.2
ATP2A1O14983 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ATP2A1O14983 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.57■■□□□ 1.2
ATP2A1O14983 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
ATP2A1O14983 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC22.57■■□□□ 1.2
ATP2A1O14983 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
ATP2A1O14983 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.57■■□□□ 1.2
ATP2A1O14983 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
ATP2A1O14983 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ATP2A1O14983 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
ATP2A1O14983 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ATP2A1O14983 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ATP2A1O14983 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC22.56■■□□□ 1.2
ATP2A1O14983 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22.56■■□□□ 1.2
ATP2A1O14983 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.56■■□□□ 1.2
ATP2A1O14983 CRAT-202ENST00000393384 973 ntTSL 2 BASIC22.56■■□□□ 1.2
ATP2A1O14983 AC011506.1-201ENST00000474329 610 ntBASIC22.56■■□□□ 1.2
ATP2A1O14983 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ATP2A1O14983 AC131212.4-201ENST00000623606 975 ntBASIC22.56■■□□□ 1.2
ATP2A1O14983 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
ATP2A1O14983 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.56■■□□□ 1.2
ATP2A1O14983 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC22.56■■□□□ 1.2
ATP2A1O14983 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ATP2A1O14983 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ATP2A1O14983 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
ATP2A1O14983 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ATP2A1O14983 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
ATP2A1O14983 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
ATP2A1O14983 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ATP2A1O14983 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ATP2A1O14983 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC22.55■■□□□ 1.2
ATP2A1O14983 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ATP2A1O14983 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ATP2A1O14983 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
ATP2A1O14983 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC22.55■■□□□ 1.2
ATP2A1O14983 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ATP2A1O14983 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC22.55■■□□□ 1.2
ATP2A1O14983 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ATP2A1O14983 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.55■■□□□ 1.2
ATP2A1O14983 GRAMD4P8-201ENST00000605465 1115 ntBASIC22.55■■□□□ 1.2
ATP2A1O14983 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
ATP2A1O14983 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ATP2A1O14983 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ATP2A1O14983 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.55■■□□□ 1.2
ATP2A1O14983 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.55■■□□□ 1.2
ATP2A1O14983 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ATP2A1O14983 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
ATP2A1O14983 KRT18P22-201ENST00000402024 1347 ntBASIC22.55■■□□□ 1.2
ATP2A1O14983 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
ATP2A1O14983 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ATP2A1O14983 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
ATP2A1O14983 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.54■■□□□ 1.2
ATP2A1O14983 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
ATP2A1O14983 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ATP2A1O14983 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
ATP2A1O14983 AC113347.1-201ENST00000413321 391 ntBASIC22.54■■□□□ 1.2
ATP2A1O14983 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC22.54■■□□□ 1.2
ATP2A1O14983 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC22.54■■□□□ 1.2
ATP2A1O14983 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC22.54■■□□□ 1.2
ATP2A1O14983 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ATP2A1O14983 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
ATP2A1O14983 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ATP2A1O14983 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC22.54■■□□□ 1.2
ATP2A1O14983 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC22.54■■□□□ 1.2
ATP2A1O14983 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC22.54■■□□□ 1.2
ATP2A1O14983 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
ATP2A1O14983 HLA-A-209ENST00000638375 975 ntBASIC22.54■■□□□ 1.2
ATP2A1O14983 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ATP2A1O14983 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATP2A1O14983 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ATP2A1O14983 TMEM179-206ENST00000616017 1645 ntBASIC22.53■■□□□ 1.2
ATP2A1O14983 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATP2A1O14983 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATP2A1O14983 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATP2A1O14983 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATP2A1O14983 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
ATP2A1O14983 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ATP2A1O14983 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.53■■□□□ 1.2
ATP2A1O14983 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC22.53■■□□□ 1.2
ATP2A1O14983 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
ATP2A1O14983 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC22.53■■□□□ 1.2
ATP2A1O14983 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC22.53■■□□□ 1.2
ATP2A1O14983 AC130371.2-201ENST00000619443 611 ntBASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms