Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL031963.3-201ENST00000606441 850 ntBASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 AL512408.1-201ENST00000569378 2000 ntBASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 KRT16P5-201ENST00000455284 522 ntBASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 MIR4785-201ENST00000585005 73 ntBASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 HTR7P1-201ENST00000538670 1336 ntBASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NPIPA3F8WFD2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 ECEL1P3-201ENST00000427961 737 ntBASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NPIPA3F8WFD2 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
NPIPA3F8WFD2 KRT8P17-201ENST00000453110 1448 ntBASIC17.9■□□□□ 0.46
NPIPA3F8WFD2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPA3F8WFD2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.9■□□□□ 0.46
NPIPA3F8WFD2 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.9■□□□□ 0.46
NPIPA3F8WFD2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPA3F8WFD2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPA3F8WFD2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPA3F8WFD2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPA3F8WFD2 AC211429.1-201ENST00000415277 523 ntBASIC17.9■□□□□ 0.46
NPIPA3F8WFD2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.9■□□□□ 0.46
NPIPA3F8WFD2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.9■□□□□ 0.46
NPIPA3F8WFD2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.9■□□□□ 0.46
NPIPA3F8WFD2 BX088651.1-201ENST00000540551 451 ntBASIC17.9■□□□□ 0.46
NPIPA3F8WFD2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.9■□□□□ 0.46
NPIPA3F8WFD2 AC004264.1-201ENST00000608354 794 ntBASIC17.9■□□□□ 0.46
NPIPA3F8WFD2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms