Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LINC01549A6NIU2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01549A6NIU2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC01549A6NIU2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01549A6NIU2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01549A6NIU2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01549A6NIU2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC01549A6NIU2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC01549A6NIU2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC01549A6NIU2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01549A6NIU2 AL358852.1-201ENST00000623174 1268 ntBASIC13.98□□□□□ -0.17
LINC01549A6NIU2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01549A6NIU2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
LINC01549A6NIU2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01549A6NIU2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01549A6NIU2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01549A6NIU2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LINC01549A6NIU2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01549A6NIU2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LINC01549A6NIU2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LINC01549A6NIU2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01549A6NIU2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LINC01549A6NIU2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01549A6NIU2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC01549A6NIU2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC01549A6NIU2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 AL049812.1-201ENST00000432563 2267 ntBASIC13.96□□□□□ -0.17
LINC01549A6NIU2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 AC105233.4-201ENST00000642045 216 ntBASIC13.96□□□□□ -0.17
LINC01549A6NIU2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01549A6NIU2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
LINC01549A6NIU2 KRT16P6-202ENST00000425692 1426 ntBASIC13.96□□□□□ -0.18
LINC01549A6NIU2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.96□□□□□ -0.18
LINC01549A6NIU2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.18
LINC01549A6NIU2 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC13.96□□□□□ -0.18
LINC01549A6NIU2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC01549A6NIU2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC01549A6NIU2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC13.96□□□□□ -0.18
LINC01549A6NIU2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC01549A6NIU2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC01549A6NIU2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LINC01549A6NIU2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC01549A6NIU2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms