Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 DPP3P2-201ENST00000416030 1696 ntBASIC21.21■□□□□ 0.99
CCDC66A2RUB6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC66A2RUB6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC66A2RUB6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC66A2RUB6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC66A2RUB6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC66A2RUB6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC66A2RUB6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC66A2RUB6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC66A2RUB6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC66A2RUB6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.21■□□□□ 0.99
CCDC66A2RUB6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC66A2RUB6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC66A2RUB6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC66A2RUB6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC66A2RUB6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC66A2RUB6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CCDC66A2RUB6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC66A2RUB6 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC66A2RUB6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC66A2RUB6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC66A2RUB6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC66A2RUB6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.2■□□□□ 0.99
CCDC66A2RUB6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CCDC66A2RUB6 AC079598.2-202ENST00000546624 1451 ntBASIC21.2■□□□□ 0.98
CCDC66A2RUB6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC66A2RUB6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC66A2RUB6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC66A2RUB6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC66A2RUB6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC66A2RUB6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC66A2RUB6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC66A2RUB6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CCDC66A2RUB6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CCDC66A2RUB6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC66A2RUB6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC66A2RUB6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CCDC66A2RUB6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC66A2RUB6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC66A2RUB6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC66A2RUB6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC66A2RUB6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC66A2RUB6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC66A2RUB6 PCDHB18P-201ENST00000524813 2368 ntBASIC21.19■□□□□ 0.98
CCDC66A2RUB6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC66A2RUB6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC66A2RUB6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC66A2RUB6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC66A2RUB6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC66A2RUB6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC66A2RUB6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CCDC66A2RUB6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC66A2RUB6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
CCDC66A2RUB6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC66A2RUB6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC66A2RUB6 AC097381.1-201ENST00000429019 1296 ntBASIC21.19■□□□□ 0.98
CCDC66A2RUB6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CCDC66A2RUB6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC66A2RUB6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CCDC66A2RUB6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC66A2RUB6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC66A2RUB6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC66A2RUB6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC66A2RUB6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC66A2RUB6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC66A2RUB6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
CCDC66A2RUB6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CCDC66A2RUB6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CCDC66A2RUB6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC66A2RUB6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC66A2RUB6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC66A2RUB6 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC66A2RUB6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC66A2RUB6 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC66A2RUB6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC66A2RUB6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC66A2RUB6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC66A2RUB6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC66A2RUB6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
CCDC66A2RUB6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC66A2RUB6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC66A2RUB6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC66A2RUB6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC66A2RUB6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC66A2RUB6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC66A2RUB6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC66A2RUB6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC66A2RUB6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC66A2RUB6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC66A2RUB6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC66A2RUB6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC66A2RUB6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC66A2RUB6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.17■□□□□ 0.98
CCDC66A2RUB6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC66A2RUB6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC66A2RUB6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC66A2RUB6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.17■□□□□ 0.98
CCDC66A2RUB6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.17■□□□□ 0.98
CCDC66A2RUB6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC66A2RUB6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms