Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 OR10C1-204ENST00000622521 1039 ntBASIC19.65■□□□□ 0.74
CCDC189A1A4V9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC189A1A4V9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC189A1A4V9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC189A1A4V9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC189A1A4V9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC189A1A4V9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC189A1A4V9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC189A1A4V9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CCDC189A1A4V9 AC009237.14-201ENST00000609975 1594 ntBASIC19.65■□□□□ 0.74
CCDC189A1A4V9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC189A1A4V9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
CCDC189A1A4V9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.65■□□□□ 0.74
CCDC189A1A4V9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC189A1A4V9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC189A1A4V9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC189A1A4V9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC189A1A4V9 CYP2T3P-201ENST00000601990 817 ntBASIC19.64■□□□□ 0.73
CCDC189A1A4V9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC189A1A4V9 AC008694.1-202ENST00000636953 945 ntBASIC19.64■□□□□ 0.73
CCDC189A1A4V9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC189A1A4V9 KRT16P6-202ENST00000425692 1426 ntBASIC19.64■□□□□ 0.73
CCDC189A1A4V9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC189A1A4V9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC189A1A4V9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CCDC189A1A4V9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC189A1A4V9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC189A1A4V9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC189A1A4V9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC189A1A4V9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC189A1A4V9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CCDC189A1A4V9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC189A1A4V9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC189A1A4V9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC189A1A4V9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC189A1A4V9 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC189A1A4V9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC189A1A4V9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC189A1A4V9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC189A1A4V9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC189A1A4V9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC189A1A4V9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC189A1A4V9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC189A1A4V9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC189A1A4V9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CCDC189A1A4V9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC189A1A4V9 PCDHB18P-201ENST00000524813 2368 ntBASIC19.63■□□□□ 0.73
CCDC189A1A4V9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC189A1A4V9 KRT8P20-201ENST00000423953 1409 ntBASIC19.63■□□□□ 0.73
CCDC189A1A4V9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC189A1A4V9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC189A1A4V9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC189A1A4V9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC189A1A4V9 BID-214ENST00000617586 542 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC189A1A4V9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC189A1A4V9 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC189A1A4V9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC189A1A4V9 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC189A1A4V9 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC189A1A4V9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC189A1A4V9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC189A1A4V9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC189A1A4V9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC189A1A4V9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC189A1A4V9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC189A1A4V9 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC189A1A4V9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC189A1A4V9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC189A1A4V9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC189A1A4V9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC189A1A4V9 AL512625.2-201ENST00000417533 625 ntBASIC19.62■□□□□ 0.73
CCDC189A1A4V9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC189A1A4V9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC189A1A4V9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC189A1A4V9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.62■□□□□ 0.73
CCDC189A1A4V9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC189A1A4V9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
CCDC189A1A4V9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC189A1A4V9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC189A1A4V9 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC189A1A4V9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC189A1A4V9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC189A1A4V9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.61■□□□□ 0.73
CCDC189A1A4V9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC189A1A4V9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC189A1A4V9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC189A1A4V9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC189A1A4V9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC189A1A4V9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC189A1A4V9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC189A1A4V9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC189A1A4V9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC189A1A4V9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC189A1A4V9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC189A1A4V9 CYP2T1P-201ENST00000432607 1285 ntBASIC19.61■□□□□ 0.73
CCDC189A1A4V9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC189A1A4V9 RARRES2P6-201ENST00000567333 442 ntBASIC19.61■□□□□ 0.73
CCDC189A1A4V9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC189A1A4V9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC189A1A4V9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms