Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 BICD1-207ENST00000551848 1962 ntBASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV3S1A0A5B6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 AC093525.10-201ENST00000625130 1569 ntBASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 PCDHB18P-201ENST00000524813 2368 ntBASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 AL133373.2-201ENST00000623187 2828 ntBASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 TEX21P-204ENST00000641479 1693 ntBASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 EDA-201ENST00000338901 1233 ntBASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 MIR939-201ENST00000401314 82 ntBASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 AC018470.1-201ENST00000624790 3129 ntBASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
TCRBV3S1A0A5B6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 AL354751.1-201ENST00000412768 1863 ntBASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 KRT8P20-201ENST00000423953 1409 ntBASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TCRBV3S1A0A5B6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 CYP21A1P-202ENST00000354927 1481 ntBASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 NOC2LP1-202ENST00000452600 2235 ntBASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 AC091305.1-201ENST00000479476 895 ntBASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 AC019069.1-201ENST00000610008 1333 ntBASIC18.4■□□□□ 0.54
TCRBV3S1A0A5B6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms