Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV5A0A0B4J249 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 LINC01465-201ENST00000408887 1940 ntBASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 PARP1-202ENST00000366792 553 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 KRT18P61-201ENST00000585825 1298 ntBASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 AL591742.1-201ENST00000604433 565 ntBASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 MYCNOS-205ENST00000641950 531 ntBASIC15.27■□□□□ 0.04
TRAV5A0A0B4J249 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TRAV5A0A0B4J249 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV5A0A0B4J249 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV5A0A0B4J249 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV5A0A0B4J249 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV5A0A0B4J249 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV5A0A0B4J249 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV5A0A0B4J249 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV5A0A0B4J249 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 BMP1-204ENST00000397814 836 ntTSL 4 BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 KRT19P1-201ENST00000405746 1186 ntBASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 TERF1P5-201ENST00000477545 1207 ntBASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV5A0A0B4J249 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 AL031963.3-201ENST00000606441 850 ntBASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 AC016405.3-201ENST00000607710 860 ntBASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV5A0A0B4J249 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms