Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AC137761.2-201ENST00000561729 223 ntBASIC16.46■□□□□ 0.23
TRBV6-7A0A0A0MS04 AC145350.3-201ENST00000569033 163 ntBASIC16.46■□□□□ 0.23
TRBV6-7A0A0A0MS04 MFSD11-216ENST00000590393 1141 ntBASIC16.46■□□□□ 0.23
TRBV6-7A0A0A0MS04 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRBV6-7A0A0A0MS04 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.46■□□□□ 0.23
TRBV6-7A0A0A0MS04 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV6-7A0A0A0MS04 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV6-7A0A0A0MS04 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRBV6-7A0A0A0MS04 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRBV6-7A0A0A0MS04 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TRBV6-7A0A0A0MS04 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV6-7A0A0A0MS04 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.46■□□□□ 0.23
TRBV6-7A0A0A0MS04 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRBV6-7A0A0A0MS04 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRBV6-7A0A0A0MS04 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRBV6-7A0A0A0MS04 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.46■□□□□ 0.22
TRBV6-7A0A0A0MS04 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRBV6-7A0A0A0MS04 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRBV6-7A0A0A0MS04 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 AC068338.2-201ENST00000563278 1430 ntBASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 KRT18P68-201ENST00000392293 1000 ntBASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 MIR6821-201ENST00000617625 74 ntBASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-7A0A0A0MS04 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 CNN2P6-201ENST00000439038 900 ntBASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-7A0A0A0MS04 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 DUX4L16-201ENST00000555130 1264 ntBASIC16.43■□□□□ 0.22
TRBV6-7A0A0A0MS04 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms