Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 POU5F1P4-201ENST00000413175 1085 ntBASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 TPRG1LP1-201ENST00000598702 760 ntBASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 AL031432.3-201ENST00000607698 485 ntBASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 AC120498.10-201ENST00000621827 505 ntBASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 AL358852.1-201ENST00000623174 1268 ntBASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 CROCCP3-202ENST00000420820 1947 ntBASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
IGKV2-28A0A075B6P5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 AC104581.1-202ENST00000635932 2618 ntBASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 KRT8P36-201ENST00000489121 1440 ntBASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 AC245052.3-201ENST00000450182 901 ntBASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 RHOF-204ENST00000537265 699 ntTSL 2 BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 AL139246.5-201ENST00000606645 996 ntBASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 AC116050.2-201ENST00000612102 1779 ntBASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
IGKV2-28A0A075B6P5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms