Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 NLRP3P1-201ENST00000622303 1785 ntBASIC5.32□□□□□ -1.56
CHD8Q9HCK8 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 SYNJ1-202ENST00000382491 6958 ntTSL 5 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 AP001324.1-201ENST00000428553 399 ntBASIC5.32□□□□□ -1.56
CHD8Q9HCK8 RN7SL447P-201ENST00000494711 245 ntBASIC5.32□□□□□ -1.56
CHD8Q9HCK8 RPSAP51-201ENST00000497462 645 ntBASIC5.32□□□□□ -1.56
CHD8Q9HCK8 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 AC245389.1-201ENST00000605141 529 ntBASIC5.32□□□□□ -1.56
CHD8Q9HCK8 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.32□□□□□ -1.56
CHD8Q9HCK8 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.32□□□□□ -1.56
CHD8Q9HCK8 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 RPL32P23-201ENST00000397237 405 ntBASIC5.31□□□□□ -1.56
CHD8Q9HCK8 AL365220.1-201ENST00000432923 399 ntBASIC5.31□□□□□ -1.56
CHD8Q9HCK8 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.31□□□□□ -1.56
CHD8Q9HCK8 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.31□□□□□ -1.56
CHD8Q9HCK8 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 AC084824.1-201ENST00000550917 1005 ntBASIC5.31□□□□□ -1.56
CHD8Q9HCK8 EDDM3DP-201ENST00000554692 434 ntBASIC5.31□□□□□ -1.56
CHD8Q9HCK8 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.31□□□□□ -1.56
CHD8Q9HCK8 AC006338.2-201ENST00000616864 791 ntBASIC5.31□□□□□ -1.56
CHD8Q9HCK8 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 AC013268.3-201ENST00000262716 2324 ntBASIC5.31□□□□□ -1.56
CHD8Q9HCK8 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 AC027279.1-201ENST00000568885 4284 ntBASIC5.31□□□□□ -1.56
CHD8Q9HCK8 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 RNA5SP30-201ENST00000365552 115 ntBASIC5.31□□□□□ -1.56
CHD8Q9HCK8 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 AC008147.3-201ENST00000548666 354 ntBASIC5.31□□□□□ -1.56
CHD8Q9HCK8 HSPE1P2-201ENST00000554777 306 ntBASIC5.31□□□□□ -1.56
CHD8Q9HCK8 MIR4277-201ENST00000578298 84 ntBASIC5.31□□□□□ -1.56
CHD8Q9HCK8 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 AP001527.1-201ENST00000566440 1957 ntBASIC5.31□□□□□ -1.56
CHD8Q9HCK8 AC123769.2-201ENST00000624332 5984 ntBASIC5.31□□□□□ -1.56
CHD8Q9HCK8 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.31□□□□□ -1.56
CHD8Q9HCK8 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.3□□□□□ -1.56
CHD8Q9HCK8 CYP4F30P-202ENST00000420048 405 ntBASIC5.3□□□□□ -1.56
CHD8Q9HCK8 TRY2P-201ENST00000448860 689 ntBASIC5.3□□□□□ -1.56
CHD8Q9HCK8 PRSS3P4-201ENST00000453323 162 ntBASIC5.3□□□□□ -1.56
CHD8Q9HCK8 AL035690.1-201ENST00000490892 383 ntBASIC5.3□□□□□ -1.56
CHD8Q9HCK8 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms