Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RPL23AP67-201ENST00000465341 474 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 AL161757.1-201ENST00000471982 321 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 SNRPD2P2-201ENST00000473818 333 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 RN7SL578P-201ENST00000477781 283 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 ZFYVE28-206ENST00000508471 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 RNU6-365P-201ENST00000517113 106 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 GSTP1P1-201ENST00000548078 319 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 AL135978.1-201ENST00000553618 1266 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 AC090282.2-201ENST00000573526 931 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 NAT9-224ENST00000583757 583 ntTSL 3 BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 AC008392.1-201ENST00000600941 437 ntTSL 2 BASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 AC118658.2-201ENST00000618697 459 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 AC241585.2-209ENST00000638217 143 ntBASIC5.65□□□□□ -1.5
KRTAP3-3Q9BYR6 FBXL13-203ENST00000379308 2577 ntTSL 5 BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 POP1-201ENST00000349693 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 RHBDF2-201ENST00000313080 3582 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 FTO-217ENST00000637001 1609 ntTSL 5 BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 RIPOR1-205ENST00000540839 4260 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 NPIPB3-210ENST00000542817 1342 ntTSL 5 BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 GAS2L3-205ENST00000547754 2340 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 ZBTB20-202ENST00000393785 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 OGDH-205ENST00000444676 3309 ntTSL 5 BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 AL356289.3-201ENST00000640049 2669 ntBASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 TBCK-204ENST00000394708 3047 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 SIRT5-204ENST00000397350 4382 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 SPECC1-204ENST00000395527 3363 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 SEC23B-202ENST00000336714 3411 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 PLXNB2-213ENST00000610984 3443 ntTSL 5 BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 GRID1-201ENST00000327946 5834 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 PSMD4-202ENST00000368884 1350 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 ITSN1-207ENST00000399338 3115 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 MYBPC3-201ENST00000256993 4217 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 MYBPC3-202ENST00000399249 4217 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 RPRD1B-201ENST00000373433 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 ATP9B-201ENST00000307671 3533 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 NPY2R-202ENST00000506608 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 ODF2-203ENST00000372807 2475 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 XRCC6-206ENST00000428575 2148 ntTSL 2 BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 SOX9-201ENST00000245479 3935 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
KRTAP3-3Q9BYR6 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 WASF3-201ENST00000335327 4790 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 TMEM105-201ENST00000332900 3321 ntAPPRIS P2 TSL 2 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 MINOS1-201ENST00000322753 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 PTGFR-201ENST00000370756 4450 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 FOSB-206ENST00000586615 3774 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 RFX6-201ENST00000332958 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AC020978.10-201ENST00000623181 2704 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 RASGRP4-204ENST00000454404 3116 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 STK33-202ENST00000358872 1991 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AC068580.4-203ENST00000636397 4038 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 SLC6A2-203ENST00000414754 3201 ntTSL 5 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AC093627.7-201ENST00000567533 3208 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 EIF3A-203ENST00000541549 4495 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AC009090.4-201ENST00000623921 3691 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 KIF2C-202ENST00000372224 2879 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 CAMK2G-202ENST00000322635 3720 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 SNX20-201ENST00000300590 3304 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 CCDC81-201ENST00000354755 2510 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 GNRH2-201ENST00000245983 425 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 ARL17A-201ENST00000329240 543 ntAPPRIS ALT2 TSL 4 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 GNRH2-202ENST00000359100 404 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 Y_RNA.52-201ENST00000362760 96 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 PLP2-201ENST00000376322 620 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 SNORA57-201ENST00000383870 149 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 Y_RNA.432-201ENST00000384087 111 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AC005042.1-201ENST00000393397 800 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AL031003.1-201ENST00000404229 172 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 BZW2-203ENST00000407633 898 ntTSL 3 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 MED20-204ENST00000409312 932 ntTSL 2 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 ADAM1A-201ENST00000424240 2129 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 TMEM256P1-201ENST00000430550 340 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 CYCSP6-201ENST00000434498 302 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AC006987.2-201ENST00000434709 527 ntBASIC5.64□□□□□ -1.51
KRTAP3-3Q9BYR6 AC112493.1-202ENST00000436019 673 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms