Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDH1Q08174 MRRFP1-201ENST00000435941 1675 ntBASIC7.03□□□□□ -1.28
PCDH1Q08174 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PCDH1Q08174 AC007998.4-201ENST00000612496 2533 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH1Q08174 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH1Q08174 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH1Q08174 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH1Q08174 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH1Q08174 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.02□□□□□ -1.29
PCDH1Q08174 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH1Q08174 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDH1Q08174 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH1Q08174 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDH1Q08174 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDH1Q08174 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH1Q08174 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH1Q08174 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
PCDH1Q08174 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH1Q08174 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH1Q08174 RNU4-91P-201ENST00000364778 135 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
PCDH1Q08174 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
PCDH1Q08174 SUGT1P2-201ENST00000379452 992 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH1Q08174 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.02□□□□□ -1.29
PCDH1Q08174 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH1Q08174 AGR3-202ENST00000402239 563 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDH1Q08174 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDH1Q08174 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
PCDH1Q08174 AC109638.1-201ENST00000417406 326 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.02□□□□□ -1.29
PCDH1Q08174 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDH1Q08174 AC093155.1-201ENST00000440164 826 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 AC108039.2-201ENST00000440214 359 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC7.02□□□□□ -1.29
PCDH1Q08174 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH1Q08174 TCEA1P3-201ENST00000443005 880 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC7.02□□□□□ -1.29
PCDH1Q08174 MTCO2P25-201ENST00000447065 681 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 PMS2P11-201ENST00000451831 574 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 DDX39BP2-208ENST00000453923 258 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC7.02□□□□□ -1.29
PCDH1Q08174 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH1Q08174 PSPC1P2-201ENST00000455130 225 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 RN7SL251P-201ENST00000464175 297 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 TAAR3P-201ENST00000466706 1078 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 RN7SL815P-201ENST00000470970 290 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 RN7SL58P-201ENST00000473445 294 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 AC004924.1-201ENST00000480160 781 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 TAAR3P-202ENST00000481759 1025 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC7.02□□□□□ -1.29
PCDH1Q08174 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH1Q08174 RPL12P7-201ENST00000493832 494 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 RN7SL445P-201ENST00000495609 293 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 RN7SL775P-201ENST00000498361 336 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 KRT19P6-201ENST00000510983 209 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC7.02□□□□□ -1.29
PCDH1Q08174 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC7.02□□□□□ -1.29
PCDH1Q08174 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDH1Q08174 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDH1Q08174 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC7.02□□□□□ -1.29
PCDH1Q08174 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDH1Q08174 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC7.02□□□□□ -1.29
PCDH1Q08174 AL121579.1-201ENST00000555129 305 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC7.02□□□□□ -1.29
PCDH1Q08174 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 BGLT3-201ENST00000564523 994 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.02□□□□□ -1.29
PCDH1Q08174 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC7.02□□□□□ -1.29
PCDH1Q08174 MRPS21P9-201ENST00000571150 257 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC7.02□□□□□ -1.29
PCDH1Q08174 AP001120.4-201ENST00000590231 108 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH1Q08174 AC012360.2-201ENST00000609349 391 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 AP005329.3-201ENST00000609924 686 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 TUG1_1.1-201ENST00000610654 145 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 AC079395.2-201ENST00000610982 737 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 AL139123.1-201ENST00000612008 430 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 MIR7844-201ENST00000616161 122 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.02□□□□□ -1.29
PCDH1Q08174 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH1Q08174 TSHZ2-205ENST00000626626 670 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.02□□□□□ -1.29
PCDH1Q08174 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH1Q08174 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.02□□□□□ -1.29
PCDH1Q08174 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
PCDH1Q08174 AC003985.2-201ENST00000562268 1669 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDH1Q08174 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDH1Q08174 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
PCDH1Q08174 AC133552.3-201ENST00000572236 1869 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
PCDH1Q08174 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
PCDH1Q08174 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
PCDH1Q08174 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH1Q08174 AC092111.1-201ENST00000618256 3358 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 OR52B5P-204ENST00000641744 3467 ntBASIC7.02□□□□□ -1.29
PCDH1Q08174 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PCDH1Q08174 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms