Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.86□□□□□ -1.47
CLDN2P57739 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CLDN2P57739 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CLDN2P57739 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CLDN2P57739 RN7SKP29-201ENST00000410957 272 ntBASIC5.86□□□□□ -1.47
CLDN2P57739 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLDN2P57739 RPS4XP5-201ENST00000419038 768 ntBASIC5.86□□□□□ -1.47
CLDN2P57739 RPS6P14-201ENST00000425165 719 ntBASIC5.86□□□□□ -1.47
CLDN2P57739 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.86□□□□□ -1.47
CLDN2P57739 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.86□□□□□ -1.47
CLDN2P57739 AC127526.2-201ENST00000426436 775 ntBASIC5.86□□□□□ -1.47
CLDN2P57739 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.86□□□□□ -1.47
CLDN2P57739 AC099677.3-201ENST00000427081 395 ntBASIC5.86□□□□□ -1.47
CLDN2P57739 RAB9AP5-201ENST00000437794 597 ntBASIC5.86□□□□□ -1.47
CLDN2P57739 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.86□□□□□ -1.47
CLDN2P57739 DNAJC19P5-201ENST00000443295 316 ntBASIC5.86□□□□□ -1.47
CLDN2P57739 RAB9AP2-201ENST00000443911 597 ntBASIC5.86□□□□□ -1.47
CLDN2P57739 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.86□□□□□ -1.47
CLDN2P57739 ACA64.4-201ENST00000459070 127 ntBASIC5.86□□□□□ -1.47
CLDN2P57739 RPSAP39-201ENST00000467439 883 ntBASIC5.86□□□□□ -1.47
CLDN2P57739 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.86□□□□□ -1.47
CLDN2P57739 RPL23AP40-201ENST00000487630 390 ntBASIC5.86□□□□□ -1.47
CLDN2P57739 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.86□□□□□ -1.47
CLDN2P57739 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.86□□□□□ -1.47
CLDN2P57739 AC008628.1-201ENST00000508663 265 ntBASIC5.86□□□□□ -1.47
CLDN2P57739 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.86□□□□□ -1.47
CLDN2P57739 SEC11B-201ENST00000518383 499 ntBASIC5.86□□□□□ -1.47
CLDN2P57739 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.86□□□□□ -1.47
CLDN2P57739 AC125612.1-201ENST00000547580 377 ntBASIC5.86□□□□□ -1.47
CLDN2P57739 GARSP1-201ENST00000570895 719 ntBASIC5.86□□□□□ -1.47
CLDN2P57739 MTND2P13-201ENST00000577438 1039 ntBASIC5.86□□□□□ -1.47
CLDN2P57739 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.86□□□□□ -1.47
CLDN2P57739 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.86□□□□□ -1.47
CLDN2P57739 AC027334.1-201ENST00000603257 310 ntBASIC5.86□□□□□ -1.47
CLDN2P57739 FAM72A-208ENST00000607379 1139 ntBASIC5.86□□□□□ -1.47
CLDN2P57739 AL352984.2-201ENST00000611153 546 ntBASIC5.86□□□□□ -1.47
CLDN2P57739 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.86□□□□□ -1.47
CLDN2P57739 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CLDN2P57739 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.86□□□□□ -1.47
CLDN2P57739 OR13C1P-202ENST00000641378 2919 ntBASIC5.86□□□□□ -1.47
CLDN2P57739 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.86□□□□□ -1.47
CLDN2P57739 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLDN2P57739 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
CLDN2P57739 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CLDN2P57739 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CLDN2P57739 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.86□□□□□ -1.47
CLDN2P57739 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN2P57739 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN2P57739 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN2P57739 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN2P57739 CR382285.2-201ENST00000624662 1495 ntBASIC5.85□□□□□ -1.47
CLDN2P57739 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN2P57739 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN2P57739 SNORD8-201ENST00000363915 110 ntBASIC5.85□□□□□ -1.47
CLDN2P57739 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
CLDN2P57739 HMGB1P20-201ENST00000402555 677 ntBASIC5.85□□□□□ -1.47
CLDN2P57739 UBE2V1P15-201ENST00000407776 448 ntBASIC5.85□□□□□ -1.47
CLDN2P57739 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN2P57739 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.85□□□□□ -1.47
CLDN2P57739 VN1R31P-201ENST00000417498 730 ntBASIC5.85□□□□□ -1.47
CLDN2P57739 AC093155.2-201ENST00000420734 937 ntBASIC5.85□□□□□ -1.47
CLDN2P57739 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.85□□□□□ -1.47
CLDN2P57739 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.85□□□□□ -1.47
CLDN2P57739 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN2P57739 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.85□□□□□ -1.47
CLDN2P57739 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.85□□□□□ -1.47
CLDN2P57739 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.85□□□□□ -1.47
CLDN2P57739 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.85□□□□□ -1.47
CLDN2P57739 GAPDHP71-201ENST00000511530 1003 ntBASIC5.85□□□□□ -1.47
CLDN2P57739 RPL7L1P4-201ENST00000513004 707 ntBASIC5.85□□□□□ -1.47
CLDN2P57739 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.85□□□□□ -1.47
CLDN2P57739 TMEM97P2-201ENST00000517841 403 ntBASIC5.85□□□□□ -1.47
CLDN2P57739 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN2P57739 GTF2IP11-201ENST00000526931 420 ntBASIC5.85□□□□□ -1.47
CLDN2P57739 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.85□□□□□ -1.47
CLDN2P57739 HMGN2P36-201ENST00000529541 409 ntBASIC5.85□□□□□ -1.47
CLDN2P57739 DPPA3P2-202ENST00000557188 1219 ntBASIC5.85□□□□□ -1.47
CLDN2P57739 AP001496.3-201ENST00000580230 913 ntBASIC5.85□□□□□ -1.47
CLDN2P57739 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.85□□□□□ -1.47
CLDN2P57739 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN2P57739 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.85□□□□□ -1.47
CLDN2P57739 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
CLDN2P57739 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN2P57739 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC5.85□□□□□ -1.47
CLDN2P57739 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN2P57739 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN2P57739 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CLDN2P57739 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.85□□□□□ -1.47
CLDN2P57739 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.85□□□□□ -1.47
CLDN2P57739 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN2P57739 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
CLDN2P57739 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.84□□□□□ -1.47
CLDN2P57739 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN2P57739 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.84□□□□□ -1.47
CLDN2P57739 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN2P57739 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
CLDN2P57739 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN2P57739 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CLDN2P57739 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CLDN2P57739 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms