Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 ZNF92P2-201ENST00000600543 1059 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.72□□□□□ -1.49
ABCD3P28288 AL021368.3-201ENST00000607119 578 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 AL136370.1-201ENST00000608166 691 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 MIR1264-201ENST00000616374 69 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 AC020978.9-201ENST00000624380 1141 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 OR7A1P-202ENST00000641542 1158 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.72□□□□□ -1.49
ABCD3P28288 AC079298.1-201ENST00000625026 1619 ntBASIC5.72□□□□□ -1.49
ABCD3P28288 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ABCD3P28288 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ABCD3P28288 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ABCD3P28288 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
ABCD3P28288 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ABCD3P28288 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ABCD3P28288 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
ABCD3P28288 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
ABCD3P28288 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
ABCD3P28288 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
ABCD3P28288 AC024651.2-201ENST00000562480 2098 ntBASIC5.71□□□□□ -1.49
ABCD3P28288 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
ABCD3P28288 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.71□□□□□ -1.49
ABCD3P28288 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
ABCD3P28288 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
ABCD3P28288 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
ABCD3P28288 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.71□□□□□ -1.5
ABCD3P28288 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.71□□□□□ -1.5
ABCD3P28288 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
ABCD3P28288 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ABCD3P28288 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.71□□□□□ -1.5
ABCD3P28288 AC006511.3-201ENST00000624929 1783 ntBASIC5.71□□□□□ -1.5
ABCD3P28288 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ABCD3P28288 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ABCD3P28288 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ABCD3P28288 RNU1-65P-201ENST00000363919 148 ntBASIC5.71□□□□□ -1.5
ABCD3P28288 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.71□□□□□ -1.5
ABCD3P28288 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.71□□□□□ -1.5
ABCD3P28288 AL590806.1-201ENST00000415818 853 ntBASIC5.71□□□□□ -1.5
ABCD3P28288 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.71□□□□□ -1.5
ABCD3P28288 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.71□□□□□ -1.5
ABCD3P28288 AL354707.3-201ENST00000427308 331 ntBASIC5.71□□□□□ -1.5
ABCD3P28288 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.71□□□□□ -1.5
ABCD3P28288 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.71□□□□□ -1.5
ABCD3P28288 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.71□□□□□ -1.5
ABCD3P28288 RPL5P7-201ENST00000444235 813 ntBASIC5.71□□□□□ -1.5
ABCD3P28288 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.71□□□□□ -1.5
ABCD3P28288 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.71□□□□□ -1.5
ABCD3P28288 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.71□□□□□ -1.5
ABCD3P28288 HSD3BP3-201ENST00000514706 994 ntBASIC5.71□□□□□ -1.5
ABCD3P28288 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ABCD3P28288 AC024405.1-201ENST00000532521 1042 ntBASIC5.71□□□□□ -1.5
ABCD3P28288 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.71□□□□□ -1.5
ABCD3P28288 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.71□□□□□ -1.5
ABCD3P28288 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.71□□□□□ -1.5
ABCD3P28288 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.71□□□□□ -1.5
ABCD3P28288 AC023158.1-201ENST00000561632 1025 ntBASIC5.71□□□□□ -1.5
ABCD3P28288 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.71□□□□□ -1.5
ABCD3P28288 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.71□□□□□ -1.5
ABCD3P28288 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.71□□□□□ -1.5
ABCD3P28288 MRPS21P8-201ENST00000569196 235 ntBASIC5.71□□□□□ -1.5
ABCD3P28288 MIR4502-201ENST00000580432 81 ntBASIC5.71□□□□□ -1.5
ABCD3P28288 AL451049.1-201ENST00000608672 497 ntBASIC5.71□□□□□ -1.5
ABCD3P28288 MIR7109-201ENST00000613748 65 ntBASIC5.71□□□□□ -1.5
ABCD3P28288 AC245389.2-201ENST00000616023 576 ntBASIC5.71□□□□□ -1.5
ABCD3P28288 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
ABCD3P28288 AC242843.1-201ENST00000618702 573 ntBASIC5.71□□□□□ -1.5
ABCD3P28288 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.71□□□□□ -1.5
ABCD3P28288 AP001153.1-201ENST00000641024 338 ntBASIC5.71□□□□□ -1.5
ABCD3P28288 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.71□□□□□ -1.5
ABCD3P28288 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.71□□□□□ -1.5
ABCD3P28288 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ABCD3P28288 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
ABCD3P28288 AC092692.1-201ENST00000623625 2595 ntBASIC5.71□□□□□ -1.5
ABCD3P28288 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.71□□□□□ -1.5
ABCD3P28288 AC027575.3-201ENST00000583058 2747 ntBASIC5.71□□□□□ -1.5
ABCD3P28288 AC020633.1-201ENST00000468439 2247 ntBASIC5.71□□□□□ -1.5
ABCD3P28288 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.71□□□□□ -1.5
ABCD3P28288 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.71□□□□□ -1.5
ABCD3P28288 AC007382.1-201ENST00000624376 2618 ntBASIC5.71□□□□□ -1.5
ABCD3P28288 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.71□□□□□ -1.5
ABCD3P28288 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
ABCD3P28288 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
ABCD3P28288 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.71□□□□□ -1.5
ABCD3P28288 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
ABCD3P28288 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ABCD3P28288 HDAC1P2-201ENST00000453661 1398 ntBASIC5.7□□□□□ -1.5
ABCD3P28288 AC096921.2-201ENST00000561507 1916 ntBASIC5.7□□□□□ -1.5
ABCD3P28288 VPS35P1-201ENST00000563400 1518 ntBASIC5.7□□□□□ -1.5
ABCD3P28288 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ABCD3P28288 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
ABCD3P28288 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.7□□□□□ -1.5
ABCD3P28288 ZNF90P1-201ENST00000480493 1951 ntBASIC5.7□□□□□ -1.5
ABCD3P28288 RNFT1P3-201ENST00000340898 1052 ntBASIC5.7□□□□□ -1.5
ABCD3P28288 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
ABCD3P28288 RN7SKP187-201ENST00000365536 330 ntBASIC5.7□□□□□ -1.5
ABCD3P28288 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.7□□□□□ -1.5
ABCD3P28288 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.7□□□□□ -1.5
ABCD3P28288 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.7□□□□□ -1.5
ABCD3P28288 GCNT1P4-201ENST00000404096 329 ntBASIC5.7□□□□□ -1.5
ABCD3P28288 RNA5SP251-201ENST00000410614 137 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms