Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.31□□□□□ -1.4
CHRNA1P02708 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.31□□□□□ -1.4
CHRNA1P02708 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CHRNA1P02708 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.31□□□□□ -1.4
CHRNA1P02708 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.31□□□□□ -1.4
CHRNA1P02708 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CHRNA1P02708 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.31□□□□□ -1.4
CHRNA1P02708 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA1P02708 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.3□□□□□ -1.4
CHRNA1P02708 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CHRNA1P02708 AC068769.1-201ENST00000474767 2426 ntBASIC6.3□□□□□ -1.4
CHRNA1P02708 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA1P02708 AC109780.1-201ENST00000451768 1344 ntBASIC6.3□□□□□ -1.4
CHRNA1P02708 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.3□□□□□ -1.4
CHRNA1P02708 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.3□□□□□ -1.4
CHRNA1P02708 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA1P02708 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA1P02708 SNORA70.9-201ENST00000384370 135 ntBASIC6.3□□□□□ -1.4
CHRNA1P02708 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA1P02708 AP003170.5-201ENST00000397185 335 ntBASIC6.3□□□□□ -1.4
CHRNA1P02708 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.3□□□□□ -1.4
CHRNA1P02708 SPTLC1P2-201ENST00000407089 121 ntBASIC6.3□□□□□ -1.4
CHRNA1P02708 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.3□□□□□ -1.4
CHRNA1P02708 HMGA1P8-201ENST00000414130 321 ntBASIC6.3□□□□□ -1.4
CHRNA1P02708 NIFKP3-201ENST00000417799 865 ntBASIC6.3□□□□□ -1.4
CHRNA1P02708 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.3□□□□□ -1.4
CHRNA1P02708 AL133173.1-201ENST00000423458 397 ntBASIC6.3□□□□□ -1.4
CHRNA1P02708 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.3□□□□□ -1.4
CHRNA1P02708 AC016027.5-201ENST00000427227 210 ntBASIC6.3□□□□□ -1.4
CHRNA1P02708 CLUHP1-201ENST00000435012 1190 ntBASIC6.3□□□□□ -1.4
CHRNA1P02708 AC015983.1-201ENST00000441577 373 ntBASIC6.3□□□□□ -1.4
CHRNA1P02708 AL450023.1-201ENST00000450868 751 ntBASIC6.3□□□□□ -1.4
CHRNA1P02708 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.3□□□□□ -1.4
CHRNA1P02708 RN7SKP248-201ENST00000516278 305 ntBASIC6.3□□□□□ -1.4
CHRNA1P02708 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.3□□□□□ -1.4
CHRNA1P02708 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.3□□□□□ -1.4
CHRNA1P02708 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.3□□□□□ -1.4
CHRNA1P02708 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.3□□□□□ -1.4
CHRNA1P02708 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.3□□□□□ -1.4
CHRNA1P02708 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA1P02708 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.3□□□□□ -1.4
CHRNA1P02708 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.3□□□□□ -1.4
CHRNA1P02708 AL589935.2-201ENST00000616471 1231 ntBASIC6.3□□□□□ -1.4
CHRNA1P02708 AL355974.3-201ENST00000617383 467 ntBASIC6.3□□□□□ -1.4
CHRNA1P02708 AC005840.5-201ENST00000619166 599 ntBASIC6.3□□□□□ -1.4
CHRNA1P02708 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.3□□□□□ -1.4
CHRNA1P02708 AC004808.2-201ENST00000627965 773 ntBASIC6.3□□□□□ -1.4
CHRNA1P02708 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA1P02708 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA1P02708 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA1P02708 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CHRNA1P02708 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA1P02708 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.3□□□□□ -1.4
CHRNA1P02708 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA1P02708 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA1P02708 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA1P02708 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHRNA1P02708 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
CHRNA1P02708 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CHRNA1P02708 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CHRNA1P02708 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CHRNA1P02708 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CHRNA1P02708 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.29□□□□□ -1.4
CHRNA1P02708 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.29□□□□□ -1.4
CHRNA1P02708 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.29□□□□□ -1.4
CHRNA1P02708 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CHRNA1P02708 RNA5SP234-201ENST00000363916 119 ntBASIC6.29□□□□□ -1.4
CHRNA1P02708 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.29□□□□□ -1.4
CHRNA1P02708 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.29□□□□□ -1.4
CHRNA1P02708 RNA5SP251-201ENST00000410614 137 ntBASIC6.29□□□□□ -1.4
CHRNA1P02708 C4BPAP1-201ENST00000415474 1893 ntBASIC6.29□□□□□ -1.4
CHRNA1P02708 NENFP1-201ENST00000419476 466 ntBASIC6.29□□□□□ -1.4
CHRNA1P02708 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.29□□□□□ -1.4
CHRNA1P02708 AC007394.1-201ENST00000421941 531 ntBASIC6.29□□□□□ -1.4
CHRNA1P02708 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.29□□□□□ -1.4
CHRNA1P02708 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.29□□□□□ -1.4
CHRNA1P02708 AL606490.1-201ENST00000452266 765 ntBASIC6.29□□□□□ -1.4
CHRNA1P02708 SBDSP1-204ENST00000453858 737 ntBASIC6.29□□□□□ -1.4
CHRNA1P02708 AP000547.1-201ENST00000454360 617 ntBASIC6.29□□□□□ -1.4
CHRNA1P02708 AC004129.2-201ENST00000457229 287 ntBASIC6.29□□□□□ -1.4
CHRNA1P02708 AC100832.1-201ENST00000471945 383 ntBASIC6.29□□□□□ -1.4
CHRNA1P02708 RN7SL727P-201ENST00000482164 296 ntBASIC6.29□□□□□ -1.4
CHRNA1P02708 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.29□□□□□ -1.4
CHRNA1P02708 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CHRNA1P02708 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.29□□□□□ -1.4
CHRNA1P02708 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CHRNA1P02708 HSPE1P2-201ENST00000554777 306 ntBASIC6.29□□□□□ -1.4
CHRNA1P02708 RBM22P12-201ENST00000567098 1255 ntBASIC6.29□□□□□ -1.4
CHRNA1P02708 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.29□□□□□ -1.4
CHRNA1P02708 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CHRNA1P02708 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.29□□□□□ -1.4
CHRNA1P02708 AL137246.2-201ENST00000613439 662 ntBASIC6.29□□□□□ -1.4
CHRNA1P02708 MIR8080-201ENST00000622224 89 ntBASIC6.29□□□□□ -1.4
CHRNA1P02708 AC020763.5-201ENST00000623298 430 ntBASIC6.29□□□□□ -1.4
CHRNA1P02708 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.29□□□□□ -1.4
CHRNA1P02708 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
CHRNA1P02708 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CHRNA1P02708 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CHRNA1P02708 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.29□□□□□ -1.4
CHRNA1P02708 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms