Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A1P02462 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
COL4A1P02462 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
COL4A1P02462 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
COL4A1P02462 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A1P02462 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A1P02462 RNU4-2-201ENST00000365668 141 ntBASIC6.67□□□□□ -1.34
COL4A1P02462 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
COL4A1P02462 AL133270.1-201ENST00000402635 279 ntBASIC6.67□□□□□ -1.34
COL4A1P02462 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.67□□□□□ -1.34
COL4A1P02462 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.67□□□□□ -1.34
COL4A1P02462 RN7SKP126-201ENST00000411143 300 ntBASIC6.67□□□□□ -1.34
COL4A1P02462 RPA2P2-201ENST00000419698 796 ntBASIC6.67□□□□□ -1.34
COL4A1P02462 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.67□□□□□ -1.34
COL4A1P02462 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
COL4A1P02462 snoU109.5-201ENST00000516231 132 ntBASIC6.67□□□□□ -1.34
COL4A1P02462 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.67□□□□□ -1.34
COL4A1P02462 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.67□□□□□ -1.34
COL4A1P02462 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.67□□□□□ -1.34
COL4A1P02462 AL049539.1-201ENST00000611964 459 ntBASIC6.67□□□□□ -1.34
COL4A1P02462 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.67□□□□□ -1.34
COL4A1P02462 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A1P02462 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.67□□□□□ -1.34
COL4A1P02462 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A1P02462 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
COL4A1P02462 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A1P02462 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A1P02462 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
COL4A1P02462 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A1P02462 PANDAR-201ENST00000629595 1506 ntBASIC6.66□□□□□ -1.34
COL4A1P02462 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A1P02462 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.66□□□□□ -1.34
COL4A1P02462 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A1P02462 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.66□□□□□ -1.34
COL4A1P02462 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.66□□□□□ -1.34
COL4A1P02462 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
COL4A1P02462 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.66□□□□□ -1.34
COL4A1P02462 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.66□□□□□ -1.34
COL4A1P02462 AC009784.1-201ENST00000426484 460 ntBASIC6.66□□□□□ -1.34
COL4A1P02462 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.66□□□□□ -1.34
COL4A1P02462 MEMO1P4-201ENST00000453590 386 ntBASIC6.66□□□□□ -1.34
COL4A1P02462 SNRPCP2-201ENST00000504370 475 ntBASIC6.66□□□□□ -1.34
COL4A1P02462 AC024940.3-201ENST00000538551 316 ntBASIC6.66□□□□□ -1.34
COL4A1P02462 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.66□□□□□ -1.34
COL4A1P02462 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.66□□□□□ -1.34
COL4A1P02462 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.66□□□□□ -1.34
COL4A1P02462 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.66□□□□□ -1.34
COL4A1P02462 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
COL4A1P02462 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.66□□□□□ -1.34
COL4A1P02462 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.66□□□□□ -1.34
COL4A1P02462 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
COL4A1P02462 AC022893.2-201ENST00000564832 3296 ntBASIC6.66□□□□□ -1.34
COL4A1P02462 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A1P02462 AC104964.3-201ENST00000606115 2860 ntBASIC6.66□□□□□ -1.34
COL4A1P02462 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A1P02462 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
COL4A1P02462 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
COL4A1P02462 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
COL4A1P02462 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.66□□□□□ -1.34
COL4A1P02462 AC114947.2-201ENST00000565748 2125 ntBASIC6.65□□□□□ -1.34
COL4A1P02462 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL4A1P02462 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL4A1P02462 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.65□□□□□ -1.34
COL4A1P02462 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.65□□□□□ -1.34
COL4A1P02462 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
COL4A1P02462 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.65□□□□□ -1.34
COL4A1P02462 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COL4A1P02462 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL4A1P02462 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.65□□□□□ -1.34
COL4A1P02462 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.65□□□□□ -1.34
COL4A1P02462 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.65□□□□□ -1.34
COL4A1P02462 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.65□□□□□ -1.34
COL4A1P02462 AC013701.1-201ENST00000522657 465 ntBASIC6.65□□□□□ -1.34
COL4A1P02462 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.65□□□□□ -1.34
COL4A1P02462 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.65□□□□□ -1.34
COL4A1P02462 AC011840.5-201ENST00000582125 771 ntBASIC6.65□□□□□ -1.34
COL4A1P02462 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.65□□□□□ -1.34
COL4A1P02462 AP005432.2-201ENST00000608162 586 ntBASIC6.65□□□□□ -1.34
COL4A1P02462 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.65□□□□□ -1.34
COL4A1P02462 uc_338.18-201ENST00000615451 175 ntBASIC6.65□□□□□ -1.34
COL4A1P02462 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.65□□□□□ -1.34
COL4A1P02462 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL4A1P02462 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
COL4A1P02462 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL4A1P02462 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL4A1P02462 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
COL4A1P02462 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.65□□□□□ -1.35
COL4A1P02462 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL4A1P02462 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
COL4A1P02462 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.65□□□□□ -1.35
COL4A1P02462 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COL4A1P02462 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.65□□□□□ -1.35
COL4A1P02462 SNURFL-201ENST00000309296 343 ntBASIC6.65□□□□□ -1.35
COL4A1P02462 RNVU1-6-201ENST00000364688 164 ntBASIC6.65□□□□□ -1.35
COL4A1P02462 RNU1-59P-201ENST00000364829 162 ntBASIC6.65□□□□□ -1.35
COL4A1P02462 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COL4A1P02462 AL009179.1-201ENST00000406085 265 ntBASIC6.65□□□□□ -1.35
COL4A1P02462 VN1R54P-201ENST00000435210 1049 ntBASIC6.65□□□□□ -1.35
COL4A1P02462 GAPDHP25-201ENST00000447061 1001 ntBASIC6.65□□□□□ -1.35
COL4A1P02462 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.65□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms