Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC7.15□□□□□ -1.26
ITGA4P13612 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.15□□□□□ -1.26
ITGA4P13612 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.15□□□□□ -1.26
ITGA4P13612 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
ITGA4P13612 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
ITGA4P13612 MTND4P5-201ENST00000435821 1374 ntBASIC7.15□□□□□ -1.26
ITGA4P13612 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
ITGA4P13612 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC7.15□□□□□ -1.26
ITGA4P13612 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
ITGA4P13612 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
ITGA4P13612 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.15□□□□□ -1.27
ITGA4P13612 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
ITGA4P13612 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.15□□□□□ -1.27
ITGA4P13612 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
ITGA4P13612 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
ITGA4P13612 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
ITGA4P13612 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
ITGA4P13612 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ITGA4P13612 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
ITGA4P13612 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.14□□□□□ -1.27
ITGA4P13612 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
ITGA4P13612 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ITGA4P13612 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ITGA4P13612 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ITGA4P13612 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.14□□□□□ -1.27
ITGA4P13612 RNU1-65P-201ENST00000363919 148 ntBASIC7.14□□□□□ -1.27
ITGA4P13612 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.14□□□□□ -1.27
ITGA4P13612 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ITGA4P13612 RNU6-636P-201ENST00000384598 107 ntBASIC7.14□□□□□ -1.27
ITGA4P13612 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ITGA4P13612 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ITGA4P13612 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
ITGA4P13612 MIR1275-201ENST00000408770 80 ntBASIC7.14□□□□□ -1.27
ITGA4P13612 AL359092.1-201ENST00000417156 265 ntBASIC7.14□□□□□ -1.27
ITGA4P13612 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ITGA4P13612 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC7.14□□□□□ -1.27
ITGA4P13612 MTCO3P5-201ENST00000433620 714 ntBASIC7.14□□□□□ -1.27
ITGA4P13612 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC7.14□□□□□ -1.27
ITGA4P13612 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
ITGA4P13612 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.14□□□□□ -1.27
ITGA4P13612 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.14□□□□□ -1.27
ITGA4P13612 AL157884.3-201ENST00000448273 1184 ntBASIC7.14□□□□□ -1.27
ITGA4P13612 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ITGA4P13612 AC104339.1-201ENST00000465478 348 ntBASIC7.14□□□□□ -1.27
ITGA4P13612 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.14□□□□□ -1.27
ITGA4P13612 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
ITGA4P13612 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC7.14□□□□□ -1.27
ITGA4P13612 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC7.14□□□□□ -1.27
ITGA4P13612 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC7.14□□□□□ -1.27
ITGA4P13612 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC7.14□□□□□ -1.27
ITGA4P13612 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.14□□□□□ -1.27
ITGA4P13612 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ITGA4P13612 SNORA3.4-201ENST00000515969 96 ntBASIC7.14□□□□□ -1.27
ITGA4P13612 SCARNA5-201ENST00000516201 276 ntBASIC7.14□□□□□ -1.27
ITGA4P13612 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.14□□□□□ -1.27
ITGA4P13612 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
ITGA4P13612 AC090819.1-201ENST00000523800 1111 ntBASIC7.14□□□□□ -1.27
ITGA4P13612 AP003486.1-201ENST00000525716 3994 ntBASIC7.14□□□□□ -1.27
ITGA4P13612 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.14□□□□□ -1.27
ITGA4P13612 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.14□□□□□ -1.27
ITGA4P13612 AC023050.2-201ENST00000544968 387 ntBASIC7.14□□□□□ -1.27
ITGA4P13612 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ITGA4P13612 CBX3P2-202ENST00000583365 535 ntBASIC7.14□□□□□ -1.27
ITGA4P13612 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC7.14□□□□□ -1.27
ITGA4P13612 AC124856.1-201ENST00000600819 896 ntBASIC7.14□□□□□ -1.27
ITGA4P13612 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.14□□□□□ -1.27
ITGA4P13612 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.14□□□□□ -1.27
ITGA4P13612 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC7.14□□□□□ -1.27
ITGA4P13612 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC7.14□□□□□ -1.27
ITGA4P13612 AC114546.4-201ENST00000624413 369 ntBASIC7.14□□□□□ -1.27
ITGA4P13612 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC7.14□□□□□ -1.27
ITGA4P13612 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC7.14□□□□□ -1.27
ITGA4P13612 UGP2-232ENST00000640075 567 ntTSL 5 BASIC7.14□□□□□ -1.27
ITGA4P13612 AC010168.2-201ENST00000562691 5428 ntBASIC7.14□□□□□ -1.27
ITGA4P13612 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
ITGA4P13612 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.14□□□□□ -1.27
ITGA4P13612 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ITGA4P13612 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ITGA4P13612 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
ITGA4P13612 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.13□□□□□ -1.27
ITGA4P13612 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
ITGA4P13612 MTCO1P25-201ENST00000414449 1799 ntBASIC7.13□□□□□ -1.27
ITGA4P13612 AC007485.2-201ENST00000623493 1667 ntBASIC7.13□□□□□ -1.27
ITGA4P13612 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ITGA4P13612 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ITGA4P13612 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ITGA4P13612 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.13□□□□□ -1.27
ITGA4P13612 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC7.13□□□□□ -1.27
ITGA4P13612 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.13□□□□□ -1.27
ITGA4P13612 ZNF876P-202ENST00000398732 1485 ntBASIC7.13□□□□□ -1.27
ITGA4P13612 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ITGA4P13612 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC7.13□□□□□ -1.27
ITGA4P13612 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ITGA4P13612 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
ITGA4P13612 AC008549.2-201ENST00000333482 706 ntBASIC7.13□□□□□ -1.27
ITGA4P13612 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ITGA4P13612 RNU5B-1-201ENST00000363286 116 ntBASIC7.13□□□□□ -1.27
ITGA4P13612 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC7.13□□□□□ -1.27
ITGA4P13612 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC7.13□□□□□ -1.27
ITGA4P13612 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms