Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC007998.1-201ENST00000474156 672 ntBASIC5.73□□□□□ -1.49
HLA-DQB2P05538 AC087672.1-201ENST00000479876 766 ntBASIC5.73□□□□□ -1.49
HLA-DQB2P05538 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 RPS17P5-201ENST00000498293 408 ntBASIC5.73□□□□□ -1.49
HLA-DQB2P05538 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 AC022826.1-201ENST00000519383 805 ntBASIC5.73□□□□□ -1.49
HLA-DQB2P05538 AP003080.1-202ENST00000526526 915 ntBASIC5.73□□□□□ -1.49
HLA-DQB2P05538 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 MIR4311-201ENST00000580794 100 ntBASIC5.73□□□□□ -1.49
HLA-DQB2P05538 AL352984.2-201ENST00000611153 546 ntBASIC5.73□□□□□ -1.49
HLA-DQB2P05538 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 AC079776.5-201ENST00000641920 211 ntBASIC5.73□□□□□ -1.49
HLA-DQB2P05538 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DQB2P05538 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 RNA5SP510-201ENST00000364697 99 ntBASIC5.72□□□□□ -1.49
HLA-DQB2P05538 RNA5SP131-201ENST00000365452 119 ntBASIC5.72□□□□□ -1.49
HLA-DQB2P05538 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 RNA5SP284-201ENST00000384547 118 ntBASIC5.72□□□□□ -1.49
HLA-DQB2P05538 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 VN1R3-201ENST00000418822 919 ntBASIC5.72□□□□□ -1.49
HLA-DQB2P05538 AL662874.1-201ENST00000426065 230 ntBASIC5.72□□□□□ -1.49
HLA-DQB2P05538 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 PCNPP2-201ENST00000441651 455 ntBASIC5.72□□□□□ -1.49
HLA-DQB2P05538 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 RN7SKP253-201ENST00000516424 309 ntBASIC5.72□□□□□ -1.49
HLA-DQB2P05538 SNORA43.3-201ENST00000517240 103 ntBASIC5.72□□□□□ -1.49
HLA-DQB2P05538 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 AC084824.2-201ENST00000548906 345 ntBASIC5.72□□□□□ -1.49
HLA-DQB2P05538 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 AC025857.2-201ENST00000602711 238 ntBASIC5.72□□□□□ -1.49
HLA-DQB2P05538 AC015982.1-201ENST00000608113 465 ntBASIC5.72□□□□□ -1.49
HLA-DQB2P05538 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 AC015712.7-201ENST00000615211 635 ntBASIC5.72□□□□□ -1.49
HLA-DQB2P05538 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 AC114774.1-201ENST00000507410 1770 ntBASIC5.72□□□□□ -1.49
HLA-DQB2P05538 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
HLA-DQB2P05538 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HLA-DQB2P05538 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
HLA-DQB2P05538 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HLA-DQB2P05538 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HLA-DQB2P05538 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HLA-DQB2P05538 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 RPL7P58-201ENST00000402913 758 ntBASIC5.71□□□□□ -1.5
HLA-DQB2P05538 MTND6P12-201ENST00000428247 522 ntBASIC5.71□□□□□ -1.5
HLA-DQB2P05538 RPS29P14-201ENST00000431518 171 ntBASIC5.71□□□□□ -1.5
HLA-DQB2P05538 RPL23AP19-201ENST00000436229 369 ntBASIC5.71□□□□□ -1.5
HLA-DQB2P05538 NANOGP9-201ENST00000439890 892 ntBASIC5.71□□□□□ -1.5
HLA-DQB2P05538 DNAJC19P5-201ENST00000443295 316 ntBASIC5.71□□□□□ -1.5
HLA-DQB2P05538 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 AC144530.1-201ENST00000452862 555 ntBASIC5.71□□□□□ -1.5
HLA-DQB2P05538 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 CYCSP22-201ENST00000517555 339 ntBASIC5.71□□□□□ -1.5
HLA-DQB2P05538 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 AC136777.2-201ENST00000522979 358 ntBASIC5.71□□□□□ -1.5
HLA-DQB2P05538 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-DQB2P05538 MIR4420-201ENST00000583944 77 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms