Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 RPS12P17-201ENST00000438591 377 ntBASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 RPSAP41-201ENST00000439695 860 ntBASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 Z83838.1-202ENST00000456225 839 ntBASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 AC104164.1-201ENST00000460282 590 ntBASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 AP002981.1-201ENST00000517692 975 ntBASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 AC110056.1-201ENST00000525759 911 ntBASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 AC090424.1-201ENST00000535243 736 ntBASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 AP002884.5-201ENST00000595053 1132 ntBASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 AL356752.1-201ENST00000615844 593 ntBASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 AC073488.3-201ENST00000631611 778 ntBASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 AL022311.1-201ENST00000623726 19416 ntBASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 GVINP1-202ENST00000531871 7271 ntBASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 TTC39DP-201ENST00000416781 1688 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 OR56A4-201ENST00000330728 1209 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 RNA5SP232-201ENST00000364144 119 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 RN7SKP171-201ENST00000364417 303 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 RNU6-729P-201ENST00000384399 107 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 MRPS21P2-201ENST00000424704 264 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AC099670.2-201ENST00000435130 321 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AC242426.1-201ENST00000435270 960 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 RPL5P7-201ENST00000444235 813 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 RPS23P9-201ENST00000448848 438 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AC092349.1-201ENST00000504903 310 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AC091874.2-201ENST00000505889 720 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AC007346.2-201ENST00000564816 892 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AC002519.2-203ENST00000567043 837 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 MIR4502-201ENST00000580432 81 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AC068768.2-201ENST00000602352 343 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AC124916.2-201ENST00000604416 224 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AL161912.3-201ENST00000605404 628 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 AC096586.2-201ENST00000610260 441 ntBASIC5.12□□□□□ -1.59
RHBDD3Q9Y3P4 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms